Skip Header

Contribute Send feedback
Read comments (?) or add your own

B8I615 (B8I615_CLOCE) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Beta-galactosidase PIRNR PIRNR001084
Short name=Beta-gal PIRNR PIRNR001084
EC=3.2.1.23 PIRNR PIRNR001084
Gene names
Ordered Locus Names:Ccel_2451
OrganismClostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) [Complete proteome] [HAMAP]
Taxonomic identifier394503 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length686 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. PIRNR PIRNR001084

Sequence similarities

Belongs to the glycosyl hydrolase 42 family. PIRNR PIRNR001084

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1571Proton donor By similarity PIRSR PIRSR001084-1
Active site3161Nucleophile By similarity PIRSR PIRSR001084-1
Metal binding1221Zinc By similarity PIRSR PIRSR001084-3
Metal binding1621Zinc By similarity PIRSR PIRSR001084-3
Metal binding1641Zinc By similarity PIRSR PIRSR001084-3
Metal binding1671Zinc By similarity PIRSR PIRSR001084-3
Binding site1181Substrate By similarity PIRSR PIRSR001084-2
Binding site1561Substrate By similarity PIRSR PIRSR001084-2
Binding site3241Substrate By similarity PIRSR PIRSR001084-2

Sequences

Sequence LengthMass (Da)Tools
B8I615 [UniParc].

Last modified March 3, 2009. Version 1.
Checksum: 18F5CB601FB553E7

FASTA68679,091
        10         20         30         40         50         60 
MDKYMPIGMN FPHILHGGDY NPDQWLKAPK ILDEDFRLMK LAHCNVMTIG IFSWMALEPE 

        70         80         90        100        110        120 
EGKFDFSWLD EIMDKLSKNE MTAILATPSG AKPSWMSQKY PEILRTQADR LKDFHGGRHN 

       130        140        150        160        170        180 
HCLTSPIYRK KVSQINRLLA ERYARHPALI LWHISNEYSG ECHCPLCQEA FRSFLMKKYE 

       190        200        210        220        230        240 
GDLERLNHEW WTGFWAHRYT DWSQIESPSP RGEHETHGLI LDWKRFVSHQ TIDFLKNEIK 

       250        260        270        280        290        300 
PLRELTPEIS VTTNLMGTFP GLEYRELSKE IDVVSWDNYP TWHTSEQPDW KIGIRTSFVH 

       310        320        330        340        350        360 
DINRSLKQGK PFMMMESTPS TVNWQKVNKL KRPGMHMLSS LQAVAHGSDT VQYFQWRKSR 

       370        380        390        400        410        420 
GSFEKFHGAV VDHVGHENTR VFREVAQVGQ VLEKLDEVVG TTVHPKVAII FDWENRWAME 

       430        440        450        460        470        480 
EAQALARDRI KYEETCVAHY TAFWKRGVSV DIIGARDNLS QYKLVIAPML YLTHPGVGER 

       490        500        510        520        530        540 
IETFVNEGGT FVATYWSGIV NENDLCHLGG FPGPLRAVTG IWSEEIDTMH PDENNSLILS 

       550        560        570        580        590        600 
DNSLGLSGTY RVQDFCDLVH AESAEVLARY GEEFYAGRPA LTVNRFGKGN AYYMAARTGE 

       610        620        630        640        650        660 
DFLEDFYNAL MKKLTLSRTL DVELPCGVTS QLRTDGQNRY IFLMNFNHEK QDIQLTKGLT 

       670        680 
DMFTGEIRQG MLELAPFDVK VLKAKI

« Hide

References

[1]"Complete sequence of Clostridium cellulolyticum H10."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Saunders E., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Ivanova N., Zhou J., Richardson P.
Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 35319 / DSM 5812 / JCM 6584 / H10.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001348 Genomic DNA. Translation: ACL76780.1.
RefSeqYP_002506760.1. NC_011898.1.

3D structure databases

ProteinModelPortalB8I615.
ModBaseSearch...

Protein-protein interaction databases

STRINGB8I615.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7311121.
GenomeReviewsGene locus Ccel_2451 in contig CP001348_GR.
KEGGcce:Ccel_2451.
PATRIC19435877. VBICloCel57783_2527.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG476453.
OMAHGSDTVQ.

Family and domain databases

InterProIPR013739. Beta_galactosidase_C.
IPR013738. Beta_galactosidase_Trimer.
IPR003476. Glyco_hydro_42.
IPR013529. Glyco_hydro_42_N.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KOK12308.
PfamPF02449. Glyco_hydro_42. 1 hit.
PF08533. Glyco_hydro_42C. 1 hit.
PF08532. Glyco_hydro_42M. 1 hit.
[Graphical view]
PIRSFPIRSF001084. B-galactosidase. 1 hit.
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB8I615_CLOCE
AccessionPrimary (citable) accession number: B8I615
Entry history
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: January 25, 2012
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info