ID   B8I5T4_RUMCH            Unreviewed;       304 AA.
AC   B8I5T4;
DT   03-MAR-2009, integrated into UniProtKB/TrEMBL.
DT   03-MAR-2009, sequence version 1.
DT   27-MAR-2024, entry version 62.
DE   SubName: Full=DNA polymerase LigD, polymerase domain protein {ECO:0000313|EMBL:ACL74751.1};
GN   OrderedLocusNames=Ccel_0366 {ECO:0000313|EMBL:ACL74751.1};
OS   Ruminiclostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 /
OS   H10) (Clostridium cellulolyticum).
OC   Bacteria; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae;
OC   Ruminiclostridium.
OX   NCBI_TaxID=394503 {ECO:0000313|EMBL:ACL74751.1, ECO:0000313|Proteomes:UP000001349};
RN   [1] {ECO:0000313|EMBL:ACL74751.1, ECO:0000313|Proteomes:UP000001349}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 35319 / DSM 5812 / JCM 6584 / H10
RC   {ECO:0000313|Proteomes:UP000001349};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA   Bruce D., Goodwin L., Pitluck S., Chertkov O., Saunders E., Brettin T.,
RA   Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N.,
RA   Ivanova N., Zhou J., Richardson P.;
RT   "Complete sequence of Clostridium cellulolyticum H10.";
RL   Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP001348; ACL74751.1; -; Genomic_DNA.
DR   RefSeq; WP_012634815.1; NC_011898.1.
DR   AlphaFoldDB; B8I5T4; -.
DR   STRING; 394503.Ccel_0366; -.
DR   KEGG; cce:Ccel_0366; -.
DR   eggNOG; COG3285; Bacteria.
DR   HOGENOM; CLU_008325_1_1_9; -.
DR   OrthoDB; 9802472at2; -.
DR   Proteomes; UP000001349; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0016874; F:ligase activity; IEA:UniProtKB-KW.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR   GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
DR   Gene3D; 3.90.920.10; DNA primase, PRIM domain; 1.
DR   InterPro; IPR014145; LigD_pol_dom.
DR   NCBIfam; TIGR02778; ligD_pol; 1.
DR   PANTHER; PTHR42705; BIFUNCTIONAL NON-HOMOLOGOUS END JOINING PROTEIN LIGD; 1.
DR   PANTHER; PTHR42705:SF2; MULTIFUNCTIONAL NON-HOMOLOGOUS END JOINING DNA REPAIR PROTEIN LIGD; 1.
DR   Pfam; PF21686; LigD_Prim-Pol; 1.
PE   4: Predicted;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW   DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW   DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW   DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW   Ligase {ECO:0000256|ARBA:ARBA00022598};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001349}.
FT   DOMAIN          33..280
FT                   /note="DNA ligase D polymerase"
FT                   /evidence="ECO:0000259|Pfam:PF21686"
SQ   SEQUENCE   304 AA;  34859 MW;  04DA049FF0CF2A7D CRC64;
     MATVTDVLKV EIENKVIDIK NPDKLFWPEA GITKLEYVKT MTKLAPFLIK YSKHRMLTSI
     RYPHGINDKS FFQKEKPQGT PEWVETVEFN QKNYINLNSA ATLVWLCTQA ALELHTSFNV
     HEKPNHPSSL VFDLDPDDDL HFEDVAELAG RIHETLEALG IMDFIKTSGA TGLQIFVPVA
     AKFDYDTARS LNEFFAQYFA EKLRSTVTIE RMKKKREGKI YFDWQQMWTG KSMITAYSAR
     AVKSAAVSAP IEWSELNDVR PEMFTLKNII NRLEQKGDIF EPSLKCDNSP QLNEISKQIE
     AAKK
//