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Protein

N utilization substance protein B homolog

Gene

Ccel_1532

Organism
Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Involved in the transcription termination process.SAAS annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

MethyltransferaseSAAS annotation, Transferase

Keywords - Biological processi

rRNA processingSAAS annotation, Transcription, Transcription regulation, Transcription terminationSAAS annotation

Keywords - Ligandi

RNA-bindingSAAS annotation, S-adenosyl-L-methionineSAAS annotation

Names & Taxonomyi

Protein namesi
Recommended name:
N utilization substance protein B homologSAAS annotation (EC:2.1.1.-SAAS annotation)
Alternative name(s):
Ribosomal RNA small subunit methyltransferase BSAAS annotation
Gene namesi
Ordered Locus Names:Ccel_1532Imported
OrganismiClostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10)Imported
Taxonomic identifieri394503 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesRuminococcaceaeRuminiclostridium
Proteomesi
  • UP000001349 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm SAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

CytoplasmSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi394503.Ccel_1532.

Structurei

3D structure databases

ProteinModelPortaliB8I258.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini172 – 448SAM_MT_RSMB_NOPInterPro annotationAdd BLAST277

Sequence similaritiesi

Belongs to the NusB family.SAAS annotation
Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.SAAS annotation

Phylogenomic databases

eggNOGiENOG4105CYJ. Bacteria.
COG0144. LUCA.
HOGENOMiHOG000037300.
KOiK03500.
OMAiHIGLYQL.
OrthoDBiPOG091H02E2.

Family and domain databases

Gene3Di1.10.940.10. 1 hit.
3.40.50.150. 1 hit.
InterProiIPR031341. Methyltr_RsmF_N.
IPR001678. MeTrfase_RsmB/NOP2.
IPR011023. Nop2p.
IPR011605. NusB_fam.
IPR006027. NusB_RsmB_TIM44.
IPR023267. RCMT.
IPR004573. rRNA_ssu_MeTfrase_B.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
PF17125. Methyltr_RsmF_N. 1 hit.
PF01029. NusB. 1 hit.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
SUPFAMiSSF48013. SSF48013. 1 hit.
SSF53335. SSF53335. 1 hit.
TIGRFAMsiTIGR00446. nop2p. 1 hit.
TIGR01951. nusB. 1 hit.
TIGR00563. rsmB. 1 hit.
PROSITEiPS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B8I258-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAVDLARETA LKILYDITEN HAYSNISVNR HLENDKLREI DRSFATELVY
60 70 80 90 100
GTVKWLLQID YVLGKYSSVK LKKLSPWIKN ILRLGIYQLL HTDRIPVSAA
110 120 130 140 150
CNTGVELAKR YGHQASSRFV NAVLRNIAKS KNNIPYPDKS DNVNYLSILY
160 170 180 190 200
SHPVWMVEKW IELYGTEFTE ELLKSNNQVP DFIIRTNTLK TDRVTLLDML
210 220 230 240 250
HKEGISAEPG RYIEEAVILK SPSSITNLEV FKNGYFQVQD ESSMLAAKIL
260 270 280 290 300
DPKEGETVID VCSAPGGKAT HMAQLMNNKG TIIARDVYQH KLKLIEQSCC
310 320 330 340 350
RLGIDIIKTE IHDACCLDET FTGKADRVLI DAPCSGLGII RKKPDIKYSR
360 370 380 390 400
TEKELREITG LQREILKNSS KYLKPGGYLL YSTCTIQQEE NLDIVSDFLE
410 420 430 440
DNPDFRLTGF QELMPPTLDI ASSAEGYIQL FPNINQTDGF FISKIKREK
Length:449
Mass (Da):51,010
Last modified:March 3, 2009 - v1
Checksum:i996096D431E70E17
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001348 Genomic DNA. Translation: ACL75884.1.
RefSeqiWP_015925025.1. NC_011898.1.

Genome annotation databases

EnsemblBacteriaiACL75884; ACL75884; Ccel_1532.
KEGGicce:Ccel_1532.
PATRICi19433927. VBICloCel57783_1576.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001348 Genomic DNA. Translation: ACL75884.1.
RefSeqiWP_015925025.1. NC_011898.1.

3D structure databases

ProteinModelPortaliB8I258.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi394503.Ccel_1532.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACL75884; ACL75884; Ccel_1532.
KEGGicce:Ccel_1532.
PATRICi19433927. VBICloCel57783_1576.

Phylogenomic databases

eggNOGiENOG4105CYJ. Bacteria.
COG0144. LUCA.
HOGENOMiHOG000037300.
KOiK03500.
OMAiHIGLYQL.
OrthoDBiPOG091H02E2.

Family and domain databases

Gene3Di1.10.940.10. 1 hit.
3.40.50.150. 1 hit.
InterProiIPR031341. Methyltr_RsmF_N.
IPR001678. MeTrfase_RsmB/NOP2.
IPR011023. Nop2p.
IPR011605. NusB_fam.
IPR006027. NusB_RsmB_TIM44.
IPR023267. RCMT.
IPR004573. rRNA_ssu_MeTfrase_B.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
PF17125. Methyltr_RsmF_N. 1 hit.
PF01029. NusB. 1 hit.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
SUPFAMiSSF48013. SSF48013. 1 hit.
SSF53335. SSF53335. 1 hit.
TIGRFAMsiTIGR00446. nop2p. 1 hit.
TIGR01951. nusB. 1 hit.
TIGR00563. rsmB. 1 hit.
PROSITEiPS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiB8I258_CLOCE
AccessioniPrimary (citable) accession number: B8I258
Entry historyi
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: November 30, 2016
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.