B8I0M3 (B8I0M3_CLOCE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Carbohydrate binding family 6 EMBL ACL75598.1

Gene names

Ordered Locus Names:

Ccel_1242

Organism

Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) [Complete proteome] [HAMAP]

Taxonomic identifier

394503 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	629 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ACL75598.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	lysosome organization Inferred from electronic annotation. Source: InterPro polysaccharide catabolic process Inferred from electronic annotation. Source: InterPro sphingolipid metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	lysosome Inferred from electronic annotation. Source: InterPro
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro glucosylceramidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 33	33	Potential EMBL ACL75598.1
	Chain	34 – 629	596	Potential EMBL ACL75598.1		PRO_5000429986

Sequences

	Sequence		Length	Mass (Da)
	B8I0M3 [UniParc]. Last modified March 3, 2009. Version 1. Checksum: 3C4A8F6EADD30B05	FASTA	629	68,463
	10 20 30 40 50 60 MITSFKKMFS VFVVCLIVFS LVFTVPVTEV SAASDVTVNL SAEKQEMRGF GGMVHTGWQS 70 80 90 100 110 120 DLTAAQRETA FGNGNGQLGF TILRIHVDEN SNNWSRGIAT AKSAIAHGGI VFASPWNPPT 130 140 150 160 170 180 SMQEKFTRNG TANQTRLKYD QYAAYAQHLN NFVKYMKDNG APLYAISVQN EPDYAHTWTW 190 200 210 220 230 240 WTPQEMLNFM KNNAGSITGA KVIAPESFQY LKNISDPILN DSTALANMDI LGAHFYGTSV 250 260 270 280 290 300 SNMPYPLFQQ KGAGKELWMT EVYVPNSDAD SADRFPEALD VAYNMHNGIV EGNFQAYVWW 310 320 330 340 350 360 YIRRSYGPMK EDGTMSKRGA MMAQYSKFVR PGYVRVDATK NPNTNVYISA YKGDGKAVIV 370 380 390 400 410 420 AINKGTSAVS QKFNLQGASS VAKVSSWVTD GSRNVAAATS YTGTSFTAQL PAQSVTTFVA 430 440 450 460 470 480 DLGTITPVEK DAFSKLEGES YDDQSGTQNG SCNEGGECLG YIENGDYAVY KNVNFGEGAQ 490 500 510 520 530 540 SFQARVSSAT TGGNIEIRLD SPNGTLVGTC PVAGTGDWQN WADVTSNVSG VSGKHDLYLT 550 560 570 580 590 600 FTGDSGYLFN INWFKFDKAP IVTGKTGDIN NDGQIDALDL LLLKKYILGL DTIENAKLAD 610 620 LDANGELNAI DFALLKQYLL GLITVLPTV

References

[1]

"Complete sequence of Clostridium cellulolyticum H10." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Saunders E., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N. , Ivanova N., Zhou J., Richardson P. Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 35319 / DSM 5812 / JCM 6584 / H10.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001348 Genomic DNA. Translation: ACL75598.1.
RefSeq	YP_002505578.1. NC_011898.1.
3D structure databases
ProteinModelPortal	B8I0M3.
ModBase	Search...
Protein-protein interaction databases
STRING	B8I0M3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7312203.
GenomeReviews	Gene locus Ccel_1242 in contig CP001348_GR.
KEGG	cce:Ccel_1242.
PATRIC	19433319. VBICloCel57783_1282.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG338051.
OMA	TILRIHV.
ProtClustDB	CLSK2534254.
Family and domain databases
InterPro	IPR016134. Cellulos_enz_dockerin_1. IPR006584. Cellulose-bd_IV. IPR005084. CMB_fam6. IPR018242. Dockerin_1. IPR018247. EF_Hand_1_Ca_BS. IPR008979. Galactose-bd-like. IPR013780. Glyco_hydro_13_b. IPR001139. Glyco_hydro_30. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:1.10.1330.10. Cellulos_enz_dockerin_1. 1 hit. G3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PANTHER	PTHR11069. Glyco_hydro_30. 1 hit.
Pfam	PF03422. CBM_6. 1 hit. PF00404. Dockerin_1. 2 hits. [Graphical view]
SMART	SM00606. CBD_IV. 1 hit. [Graphical view]
SUPFAM	SSF63446. Cellulos_enz_dockerin_1. 1 hit. SSF49785. Gal_bind_like. 1 hit. SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS51175. CBM6. 1 hit. PS00018. EF_HAND_1. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B8I0M3_CLOCE

Accession

Primary (citable) accession number: B8I0M3

Entry history

Integrated into UniProtKB/TrEMBL:	March 3, 2009
Last sequence update:	March 3, 2009
Last modified:	December 14, 2011
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)