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Protein

Ribosomal RNA small subunit methyltransferase B

Gene

Cyan7425_0682

Organism
Cyanothece sp. (strain PCC 7425 / ATCC 29141)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

MethyltransferaseSAAS annotation, Transferase

Keywords - Biological processi

rRNA processingSAAS annotation

Keywords - Ligandi

RNA-bindingSAAS annotation, S-adenosyl-L-methionineSAAS annotation

Enzyme and pathway databases

BioCyciCSP395961:GJDE-488-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosomal RNA small subunit methyltransferase BSAAS annotation (EC:2.1.1.-SAAS annotation)
Gene namesi
Ordered Locus Names:Cyan7425_0682Imported
OrganismiCyanothece sp. (strain PCC 7425 / ATCC 29141)Imported
Taxonomic identifieri395961 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesCyanothece
Proteomesi
  • UP000002511 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm SAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

CytoplasmSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi395961.Cyan7425_0682.

Structurei

3D structure databases

ProteinModelPortaliB8HV23.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini170 – 443274SAM_MT_RSMB_NOPInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.SAAS annotation

Phylogenomic databases

eggNOGiENOG4105CYJ. Bacteria.
COG0144. LUCA.
HOGENOMiHOG000037300.
KOiK03500.
OMAiHIGLYQL.
OrthoDBiPOG091H02E2.

Family and domain databases

Gene3Di1.10.940.10. 1 hit.
3.40.50.150. 1 hit.
InterProiIPR001678. MeTrfase_RsmB/NOP2.
IPR006027. NusB_RsmB_TIM44.
IPR023267. RCMT.
IPR004573. rRNA_ssu_MeTfrase_B.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
PF01029. NusB. 1 hit.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
SUPFAMiSSF48013. SSF48013. 1 hit.
SSF53335. SSF53335. 1 hit.
TIGRFAMsiTIGR00563. rsmB. 1 hit.
PROSITEiPS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B8HV23-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNARQLAFIT LQAVHRGAYA DVAVERSLRQ HPLTEERERR LATELVYGCV
60 70 80 90 100
RRQRTLDALV DQLAKKPARQ QPPDLRTLLH LGLYQLRYLN HIPANAAVHT
110 120 130 140 150
TVELVKHRGL AGLAGFVNGL LRQYIRQSAG GDPLSLPTDP VQQLALLHSY
160 170 180 190 200
PDWIVANWME QIGTTETDQL CQWLNRPPSI DLRINPLQTS IEQVGSAFQS
210 220 230 240 250
AGVSVQPLAG LPQGLRLTEP SGAIEQLPGF AQGWWSVQDA SAQLVSHLLN
260 270 280 290 300
PQPGEVIIDA CAAPGGKSTH IAELIGDKGI VWACDRTPSR LKKLEQNRQR
310 320 330 340 350
LKLNSIRICQ GDSRMSEFTA QADRVLLDAP CSGLGTLHRH ADARWRQTPE
360 370 380 390 400
SVAQLAQLQT ELLHHTATWV KPGGTLVYAT CTLHPTENEA VIQQFLAHHP
410 420 430 440
QWQIQAPRHP PFSADWLAPQ GWIKVWPHRH QMDGFFMVRL GRS
Length:443
Mass (Da):49,419
Last modified:March 3, 2009 - v1
Checksum:i6713493C91E98BCE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001344 Genomic DNA. Translation: ACL43070.1.
RefSeqiWP_012626168.1. NC_011884.1.

Genome annotation databases

EnsemblBacteriaiACL43070; ACL43070; Cyan7425_0682.
KEGGicyn:Cyan7425_0682.
PATRICi21562271. VBICyaSp30657_0670.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001344 Genomic DNA. Translation: ACL43070.1.
RefSeqiWP_012626168.1. NC_011884.1.

3D structure databases

ProteinModelPortaliB8HV23.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi395961.Cyan7425_0682.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACL43070; ACL43070; Cyan7425_0682.
KEGGicyn:Cyan7425_0682.
PATRICi21562271. VBICyaSp30657_0670.

Phylogenomic databases

eggNOGiENOG4105CYJ. Bacteria.
COG0144. LUCA.
HOGENOMiHOG000037300.
KOiK03500.
OMAiHIGLYQL.
OrthoDBiPOG091H02E2.

Enzyme and pathway databases

BioCyciCSP395961:GJDE-488-MONOMER.

Family and domain databases

Gene3Di1.10.940.10. 1 hit.
3.40.50.150. 1 hit.
InterProiIPR001678. MeTrfase_RsmB/NOP2.
IPR006027. NusB_RsmB_TIM44.
IPR023267. RCMT.
IPR004573. rRNA_ssu_MeTfrase_B.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
PF01029. NusB. 1 hit.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
SUPFAMiSSF48013. SSF48013. 1 hit.
SSF53335. SSF53335. 1 hit.
TIGRFAMsiTIGR00563. rsmB. 1 hit.
PROSITEiPS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiB8HV23_CYAP4
AccessioniPrimary (citable) accession number: B8HV23
Entry historyi
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: September 7, 2016
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.