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Protein
Submitted name:

Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S)

Gene

Cyan7425_3561

Organism
Cyanothece sp. (strain PCC 7425 / ATCC 29141)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciCSP395961:GJDE-3397-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S)Imported
Gene namesi
Ordered Locus Names:Cyan7425_3561Imported
OrganismiCyanothece sp. (strain PCC 7425 / ATCC 29141)Imported
Taxonomic identifieri395961 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesCyanothece
ProteomesiUP000002511 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi395961.Cyan7425_3561.

Structurei

3D structure databases

ProteinModelPortaliB8HRL5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2202.
HOGENOMiHOG000088051.
OMAiYIWFETL.
OrthoDBiEOG69GZGV.

Family and domain databases

Gene3Di3.20.20.450. 1 hit.
3.30.450.40. 1 hit.
InterProiIPR001633. EAL_dom.
IPR003018. GAF.
IPR029016. GAF_dom_like.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR013655. PAS_fold_3.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF01590. GAF. 1 hit.
PF00990. GGDEF. 1 hit.
PF08447. PAS_3. 2 hits.
PF13426. PAS_9. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00065. GAF. 1 hit.
SM00267. GGDEF. 1 hit.
SM00086. PAC. 3 hits.
SM00091. PAS. 3 hits.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55781. SSF55781. 1 hit.
SSF55785. SSF55785. 3 hits.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 3 hits.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
PS50113. PAC. 3 hits.
PS50112. PAS. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B8HRL5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MERQHRSPVE QISPEDWENT PASVKRLVDV LLSSSTAAGQ ESHLIQFLDA
60 70 80 90 100
TPIGIAVHDA TGQLTYINQA GQTILSIDRA YQVSTDQLSE VFQVYRQGTQ
110 120 130 140 150
KLYPAESLPS TLALAGQVVG VDDLELHRRG QVIPLEVWAS PIFDAQGEVT
160 170 180 190 200
HTIATFQDIS ARRQLETERK RYEQEQLQRE QSLNRVFQSI RNSLDLNTIF
210 220 230 240 250
TTATEETAQL LKPLNCFVVQ YLPEQGIWQH VAEFNHEPGS ASTIGLEIPD
260 270 280 290 300
ADNPFAAQLK QLQTVRVEDT SQVDDKINRE LARDTPGAWL LIPLVIEGQL
310 320 330 340 350
WGSFTVTAVQ RPFTWNHNQV QLAQAVAAQL EVAIHQANLY QQLQMELAER
360 370 380 390 400
CQAEAALRES ESRFQNIAAN IPGIIYGYRF CADGSDQFTY ISSGFCEVYG
410 420 430 440 450
FEPDEALQDS SIIWQMTHPD DLERLKQSVI ESYQTLQRWR CQYRVMTPAG
460 470 480 490 500
QLKWLEGVSR PTRQPNGDVI WDGLIIDISD RKQVEVALQE SEARYRLLAE
510 520 530 540 550
NMNDLVCLHD LEGHYLYVSP SCETLLGYRQ DEMLGQVPFN FFHPDDQGRI
560 570 580 590 600
YQEAFIPALS GEPRPITYRM RQKSGNYIWF ETLTKPIFGQ TGQIVQLQTT
610 620 630 640 650
SRDVTERIQV QEQLKYDALH DALTGLPNRL LLMERLELAI HRAQRLPGYH
660 670 680 690 700
FAVLFLDLDR FKIINDSLGH LAGDQLLTAV AEKLCSTLRD IDLVARLGGD
710 720 730 740 750
EFVILLEEVK DIQEIIKFVD EIFAGLQIPI LIAGCEVYIT ASIGIVFSDD
760 770 780 790 800
KPAQASHLLR NADIAMYRAK AKGKDRYEIF NMEMHAQALN RLHLENDLRR
810 820 830 840 850
AVERQELILH YQPILALDTG HIVGFETLVR WKHPIQGLKF PADFIAMAEE
860 870 880 890 900
TGLITHIDIW AISMACHQLA KWQAAFPGTK MKVSVNLSAH DLRRSNLLED
910 920 930 940 950
IDNVLAQANI DGCCLCLEIT ESMLIEDIES TIKLLNQLKE RGVQILIDDF
960 970 980 990 1000
GTGYSSLSYL HRLPVDSLKV DRSFVNQIQV DNRNAKIVET IASLSVSLGL
1010 1020 1030 1040 1050
DAIAEGIETP KQLKRLQKLG YKFGQGYLFS QPLTHKEVEI LLGSQYCYNL

R
Length:1,051
Mass (Da):119,117
Last modified:March 3, 2009 - v1
Checksum:i9EE688CCA3733108
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001344 Genomic DNA. Translation: ACL45882.1.
RefSeqiWP_012628942.1. NC_011884.1.
YP_002484243.1. NC_011884.1.

Genome annotation databases

EnsemblBacteriaiACL45882; ACL45882; Cyan7425_3561.
KEGGicyn:Cyan7425_3561.
PATRICi21568085. VBICyaSp30657_3541.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001344 Genomic DNA. Translation: ACL45882.1.
RefSeqiWP_012628942.1. NC_011884.1.
YP_002484243.1. NC_011884.1.

3D structure databases

ProteinModelPortaliB8HRL5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi395961.Cyan7425_3561.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACL45882; ACL45882; Cyan7425_3561.
KEGGicyn:Cyan7425_3561.
PATRICi21568085. VBICyaSp30657_3541.

Phylogenomic databases

eggNOGiCOG2202.
HOGENOMiHOG000088051.
OMAiYIWFETL.
OrthoDBiEOG69GZGV.

Enzyme and pathway databases

BioCyciCSP395961:GJDE-3397-MONOMER.

Family and domain databases

Gene3Di3.20.20.450. 1 hit.
3.30.450.40. 1 hit.
InterProiIPR001633. EAL_dom.
IPR003018. GAF.
IPR029016. GAF_dom_like.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR013655. PAS_fold_3.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF01590. GAF. 1 hit.
PF00990. GGDEF. 1 hit.
PF08447. PAS_3. 2 hits.
PF13426. PAS_9. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00065. GAF. 1 hit.
SM00267. GGDEF. 1 hit.
SM00086. PAC. 3 hits.
SM00091. PAS. 3 hits.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55781. SSF55781. 1 hit.
SSF55785. SSF55785. 3 hits.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 3 hits.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
PS50113. PAC. 3 hits.
PS50112. PAS. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Novel metabolic attributes of the genus Cyanothece, comprising a group of unicellular nitrogen-fixing Cyanobacteria."
    Bandyopadhyay A., Elvitigala T., Welsh E., Stockel J., Liberton M., Min H., Sherman L.A., Pakrasi H.B.
    MBio 2:E214-E214(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 7425 / ATCC 29141Imported.

Entry informationi

Entry nameiB8HRL5_CYAP4
AccessioniPrimary (citable) accession number: B8HRL5
Entry historyi
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: June 24, 2015
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.