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Protein
Submitted name:

Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S)

Gene

Cyan7425_3556

Organism
Cyanothece sp. (strain PCC 7425 / ATCC 29141)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. phosphorelay sensor kinase activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciCSP395961:GJDE-3387-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S)Imported
Gene namesi
Ordered Locus Names:Cyan7425_3556Imported
OrganismiCyanothece sp. (strain PCC 7425 / ATCC 29141)Imported
Taxonomic identifieri395961 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesCyanothece
ProteomesiUP000002511 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3232 PotentialImportedAdd
BLAST
Chaini33 – 905873 PotentialImportedPRO_5000429567Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi395961.Cyan7425_3556.

Structurei

3D structure databases

ProteinModelPortaliB8HRL0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

eggNOGiCOG5001.
OMAiNEVATHP.
OrthoDBiEOG69GZGV.

Family and domain databases

Gene3Di3.20.20.450. 1 hit.
InterProiIPR007892. CHASE4.
IPR001633. EAL_dom.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR013655. PAS_fold_3.
[Graphical view]
PfamiPF05228. CHASE4. 1 hit.
PF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
PF08447. PAS_3. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00267. GGDEF. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55785. SSF55785. 1 hit.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 1 hit.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
PS50113. PAC. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

B8HRL0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRIRNFLMRV QTRLFILLTA VVALTVVGIR SIDTTERQRL LTIANGMEQD
60 70 80 90 100
RNVFFRQLIK LKGESLENFV HNYTYWDELI QFTKAPDPKW ARDQLEASMP
110 120 130 140 150
SFKLDGIWVY NLNKKLVYAT VNRSSPSNPP ALPLPDRDLV AFLQLLHRQR
160 170 180 190 200
FAHFFVQTPQ GLLEVRAATI HPSDDPEHRT APQGYFLAGR LWSKQFLTHL
210 220 230 240 250
GSMVHAQIEL LPPDHQPLSK LSKLDVQQGI LTNLSPLRGW DQQVVAQLSF
260 270 280 290 300
KSASPLLGQL DAAYDDQLLQ AVVVGGLMCL ILLFALVVWV VLPLRSLSQA
310 320 330 340 350
LVVEDASLIH KLSTAKTEFG ELAQLILKFF HQKELLLSEI AVRKSVETEL
360 370 380 390 400
RQSEERYVLA AAGANDGLWD WDLQQNQIYF SNRWKSMLGF AELEIPNQVE
410 420 430 440 450
AWLERIHPED REQMQHCLQE HLEGKSEHFE YEYRMRLKDG SYRWMLCRGL
460 470 480 490 500
AVRDQVGQAY RIAGSQTDLT DRKALYDPLT HLANRSLLME RLRQAMQIRE
510 520 530 540 550
RYPARLFAVL FLDLDRFKWV NDSLGHWIGD RLLIEIAARL KALSRSEDTV
560 570 580 590 600
ARLGGDEFVL LLANLSTPAE AIAVASRIQH TLAQVFEIEG HTIYTGTSIG
610 620 630 640 650
IAFADHLEQK GEELLQYADM AMYQSKSRGG NNVQVFDTAM RVGTSNRLKL
660 670 680 690 700
ELELRQALEQ QQLLLYYQPI VCLSTGTLQG FEALVRWQHP QAGLLSPVDF
710 720 730 740 750
LPLAEETGLI LPIGTWILQT ACSQMYSWQQ QIQADVPLSI SVNFSTRQFF
760 770 780 790 800
HPNFLQQIQT ILSETGLAPH CLKLELTEHT MIEDAERAAR LLSQLNALGI
810 820 830 840 850
DIQLDDFGTG FSSLSHLHEF PIHTLKIDRC FTQQALDSSR HKEIVQAVVT
860 870 880 890 900
LAHNLGLSVV AEGIETKAQY EQLRNLGCDY GQGYFFTPPL DLFQATAWMT

ASGSP
Length:905
Mass (Da):102,926
Last modified:March 3, 2009 - v1
Checksum:i343567BC96C8F7DF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001344 Genomic DNA. Translation: ACL45877.1.
RefSeqiWP_012628937.1. NC_011884.1.
YP_002484238.1. NC_011884.1.

Genome annotation databases

EnsemblBacteriaiACL45877; ACL45877; Cyan7425_3556.
KEGGicyn:Cyan7425_3556.
PATRICi21568065. VBICyaSp30657_3536.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001344 Genomic DNA. Translation: ACL45877.1.
RefSeqiWP_012628937.1. NC_011884.1.
YP_002484238.1. NC_011884.1.

3D structure databases

ProteinModelPortaliB8HRL0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi395961.Cyan7425_3556.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACL45877; ACL45877; Cyan7425_3556.
KEGGicyn:Cyan7425_3556.
PATRICi21568065. VBICyaSp30657_3536.

Phylogenomic databases

eggNOGiCOG5001.
OMAiNEVATHP.
OrthoDBiEOG69GZGV.

Enzyme and pathway databases

BioCyciCSP395961:GJDE-3387-MONOMER.

Family and domain databases

Gene3Di3.20.20.450. 1 hit.
InterProiIPR007892. CHASE4.
IPR001633. EAL_dom.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR013655. PAS_fold_3.
[Graphical view]
PfamiPF05228. CHASE4. 1 hit.
PF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
PF08447. PAS_3. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00267. GGDEF. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55785. SSF55785. 1 hit.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 1 hit.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
PS50113. PAC. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Novel metabolic attributes of the genus Cyanothece, comprising a group of unicellular nitrogen-fixing Cyanobacteria."
    Bandyopadhyay A., Elvitigala T., Welsh E., Stockel J., Liberton M., Min H., Sherman L.A., Pakrasi H.B.
    MBio 2:E214-E214(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 7425 / ATCC 29141Imported.

Entry informationi

Entry nameiB8HRL0_CYAP4
AccessioniPrimary (citable) accession number: B8HRL0
Entry historyi
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: April 1, 2015
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.