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Protein
Submitted name:

Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S)

Gene

Cyan7425_4974

Organism
Cyanothece sp. (strain PCC 7425 / ATCC 29141)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. phosphorelay sensor kinase activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciCSP395961:GJDE-4819-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S)Imported
Gene namesi
Ordered Locus Names:Cyan7425_4974Imported
OrganismiCyanothece sp. (strain PCC 7425 / ATCC 29141)Imported
Taxonomic identifieri395961 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesCyanothece
ProteomesiUP000002511: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi395961.Cyan7425_4974.

Structurei

3D structure databases

ProteinModelPortaliB8HNE5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2202.
HOGENOMiHOG000136246.
OMAiRTLFMDR.
OrthoDBiEOG69GZGV.

Family and domain databases

Gene3Di3.20.20.450. 1 hit.
3.30.450.40. 1 hit.
InterProiIPR001633. EAL_dom.
IPR003018. GAF.
IPR029016. GAF_dom_like.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR013656. PAS_4.
IPR013655. PAS_fold_3.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF01590. GAF. 1 hit.
PF00990. GGDEF. 1 hit.
PF08447. PAS_3. 1 hit.
PF08448. PAS_4. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00065. GAF. 1 hit.
SM00267. GGDEF. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 2 hits.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55781. SSF55781. 1 hit.
SSF55785. SSF55785. 2 hits.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 2 hits.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
PS50113. PAC. 1 hit.
PS50112. PAS. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B8HNE5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDGAGAALGG SEGRLRRQNQ TLVDLSRRQK FYRGDFQAAL AEITQMAAST
60 70 80 90 100
LEVERVGVFL YNADRNAIQC INLYERGPNR HSQGITLFAK DYPQYFQALE
110 120 130 140 150
SERIIAAHDA GADPRTAEFQ PNYLIPLGLT SLLDAPIWVG GTMVGVVCHE
160 170 180 190 200
HMGLKRYWLP EEQSFAGAIA DMVALALEAR DRQQAEAELQ KTNQQLRNIL
210 220 230 240 250
ESLTSGFFSL NETAEFTYIN PQAEPLLQHS RAELLGHNLW QFFPALRDSS
260 270 280 290 300
FFPYYQEAIT DQVTVKFEDY YPRLNRWLEI HICPFQTGVA VYLADISERK
310 320 330 340 350
RTEAALMETK ERYALAIQGA NDGIWDWNLV NNEIYFSSRW KTILGYSESE
360 370 380 390 400
VDNCLEEWFS RIHPQDLERV KLKLNLHQQG QSSHFEEEYR LRHKNGKYRW
410 420 430 440 450
VLSRGIAVRN SEGKAYRMAG SLSDISEQRL AQEQLMHDAL HDPLTGLPNR
460 470 480 490 500
TLFMDRLRQV IHHARRHRNY NFAVLFVDLD RFKVINDSLG HLAGDTLLIE
510 520 530 540 550
LAHRFQIGLR PDDTVARLGG DEFVILLDDL LEVEESIRIA HRIQTLVQQP
560 570 580 590 600
FIINGQTVFT SASIGIAPKD THHHKPEHYL RNADIAMYRA KAAGGSRHVL
610 620 630 640 650
FTSVMHTSAL VRLQLETDLR QALERQELRL QYQPILCLNT DQIVGFEALV
660 670 680 690 700
RWQHPRDGLI APGHFITVAE ETGLIVPIGE WVLQEACRQM QCWHTQFGQV
710 720 730 740 750
LPLMVSVNLS SKQLSQPDLL QQVDRMLAET GLRPQQLKLE ITESMILDNT
760 770 780 790 800
EVARQTLLKL KERQIQLSMD DFGTGYSSLN YLHRLPIDLL KIDRSFIHEM
810 820 830 840 850
DSGEESRELV RAIISIAHSL KMQVIAEGIE TRSQLEQLHE LGCEFGQGYL
860 870
FSTPLDPEPA ADFLQQAFLK QTNSPIS
Length:877
Mass (Da):100,270
Last modified:March 3, 2009 - v1
Checksum:i9118B1F24CF3E4CC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001344 Genomic DNA. Translation: ACL47272.1.
RefSeqiWP_012630309.1. NC_011884.1.
YP_002485633.1. NC_011884.1.

Genome annotation databases

EnsemblBacteriaiACL47272; ACL47272; Cyan7425_4974.
GeneIDi7290927.
KEGGicyn:Cyan7425_4974.
PATRICi21570937. VBICyaSp30657_4957.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001344 Genomic DNA. Translation: ACL47272.1.
RefSeqiWP_012630309.1. NC_011884.1.
YP_002485633.1. NC_011884.1.

3D structure databases

ProteinModelPortaliB8HNE5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi395961.Cyan7425_4974.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACL47272; ACL47272; Cyan7425_4974.
GeneIDi7290927.
KEGGicyn:Cyan7425_4974.
PATRICi21570937. VBICyaSp30657_4957.

Phylogenomic databases

eggNOGiCOG2202.
HOGENOMiHOG000136246.
OMAiRTLFMDR.
OrthoDBiEOG69GZGV.

Enzyme and pathway databases

BioCyciCSP395961:GJDE-4819-MONOMER.

Family and domain databases

Gene3Di3.20.20.450. 1 hit.
3.30.450.40. 1 hit.
InterProiIPR001633. EAL_dom.
IPR003018. GAF.
IPR029016. GAF_dom_like.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR013656. PAS_4.
IPR013655. PAS_fold_3.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF01590. GAF. 1 hit.
PF00990. GGDEF. 1 hit.
PF08447. PAS_3. 1 hit.
PF08448. PAS_4. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00065. GAF. 1 hit.
SM00267. GGDEF. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 2 hits.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55781. SSF55781. 1 hit.
SSF55785. SSF55785. 2 hits.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 2 hits.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
PS50113. PAC. 1 hit.
PS50112. PAS. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Novel metabolic attributes of the genus Cyanothece, comprising a group of unicellular nitrogen-fixing Cyanobacteria."
    Bandyopadhyay A., Elvitigala T., Welsh E., Stockel J., Liberton M., Min H., Sherman L.A., Pakrasi H.B.
    MBio 2:E214-E214(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 7425 / ATCC 29141Imported.

Entry informationi

Entry nameiB8HNE5_CYAP4
AccessioniPrimary (citable) accession number: B8HNE5
Entry historyi
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: January 7, 2015
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.