B8HMS1 (B8HMS1_CYAP4) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
50S ribosomal protein L15 HAMAP MF_01341

Gene names

Name:	rplO HAMAP MF_01341
Ordered Locus Names:	Cyan7425_1309

Organism

Cyanothece sp. (strain PCC 7425 / ATCC 29141) [Complete proteome] [HAMAP] EMBL ACL43686.1

Taxonomic identifier

395961 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Chroococcales › Cyanothece

Protein attributes

Sequence length	147 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds to the 23S rRNA By similarity. HAMAP MF_01341
Subunit structure	Part of the 50S ribosomal subunit By similarity. HAMAP MF_01341
Sequence similarities	Belongs to the ribosomal protein L15P family. HAMAP MF_01341

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding HAMAP MF_01341
Molecular function	Ribonucleoprotein Ribosomal protein HAMAP MF_01341 EMBL ACL43686.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: HAMAP
Cellular component	large ribosomal subunit Inferred from electronic annotation. Source: InterPro
Molecular function	rRNA binding Inferred from electronic annotation. Source: HAMAP structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B8HMS1 [UniParc]. Last modified March 3, 2009. Version 1. Checksum: 3ED565E396856F1C	FASTA	147	15,498
	10 20 30 40 50 60 MRLADAQPNP TSRRRRRRIG RGISAGQGAS GGFGMRGQKS RSGRPTRPGF EGGQNPLYRR 70 80 90 100 110 120 IPKLKHFPLI NRQQYTTINV GSLNNLPAGT VVSLSSLIDA GIITTDDGPL KVLGDGDLTV 130 140 KLQVEAAGFT QAAEAKITAA GGSCTVI

References

[1]

"Complete sequence of chromosome Cyanothece sp. PCC 7425." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Meineke L., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N. , Ovchinnikova G., Liberton M., Stoeckel J., Banerjee A., Singh A., Page L., Sato H., Zhao L., Sherman L., Pakrasi H.B., Richardson P. Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: PCC 7425 / ATCC 29141.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001344 Genomic DNA. Translation: ACL43686.1.
RefSeq	YP_002482047.1. NC_011884.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	B8HMS1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7287230.
GenomeReviews	Gene locus Cyan7425_1309 in contig CP001344_GR.
KEGG	cyn:Cyan7425_1309.
PATRIC	21563545. VBICyaSp30657_1296.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG727142.
OMA	RKGRGHA.
PhylomeDB	B8HMS1.
ProtClustDB	PRK05592.
Family and domain databases
HAMAP	MF_01341_B. Ribosomal_L15_B. [Tree]
InterPro	IPR005749. Ribosomal_L15_bac-type. IPR001196. Ribosomal_L15_CS. IPR021131. Ribosomal_L18e/L15P. [Graphical view]
KO	K02876.
PANTHER	PTHR12934. Ribosom_L15_bac. 1 hit.
Pfam	PF00828. Ribosomal_L18e. 1 hit. [Graphical view]
SUPFAM	SSF52080. Ribosomal_L18e/L15. 1 hit.
TIGRFAMs	TIGR01071. RplO_bact. 1 hit.
PROSITE	PS00475. RIBOSOMAL_L15. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B8HMS1_CYAP4

Accession

Primary (citable) accession number: B8HMS1

Entry history

Integrated into UniProtKB/TrEMBL:	March 3, 2009
Last sequence update:	March 3, 2009
Last modified:	December 14, 2011
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)