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Protein
Submitted name:

Conserved repeat domain protein

Gene

Achl_3384

Organism
Pseudarthrobacter chlorophenolicus (strain ATCC 700700 / DSM 12829 / CIP 107037 / JCM 12360 / KCTC 9906 / NCIMB 13794 / A6) (Arthrobacter chlorophenolicus)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyciACHL452863:GH1A-3442-MONOMER.

Protein family/group databases

CAZyiGH33. Glycoside Hydrolase Family 33.

Names & Taxonomyi

Protein namesi
Submitted name:
Conserved repeat domain proteinImported (EC:3.2.1.18Imported)
Gene namesi
Ordered Locus Names:Achl_3384Imported
OrganismiPseudarthrobacter chlorophenolicus (strain ATCC 700700 / DSM 12829 / CIP 107037 / JCM 12360 / KCTC 9906 / NCIMB 13794 / A6) (Arthrobacter chlorophenolicus)Imported
Taxonomic identifieri452863 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaMicrococcalesMicrococcaceaePseudarthrobacter
Proteomesi
  • UP000002505 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2424Sequence analysisAdd
BLAST
Chaini25 – 978954Sequence analysisPRO_5002870791Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi452863.Achl_3384.

Structurei

3D structure databases

ProteinModelPortaliB8HGS5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini68 – 387320SialidasesInterPro annotationAdd
BLAST
Domaini423 – 49169NPCBM_assocInterPro annotationAdd
BLAST

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4108478. Bacteria.
COG4409. LUCA.
HOGENOMiHOG000238241.
KOiK01186.
OMAiDRMDENK.
OrthoDBiEOG6M9F57.

Family and domain databases

Gene3Di2.120.10.10. 1 hit.
2.60.40.10. 1 hit.
InterProiIPR018905. A-galactase_NEW3.
IPR001434. DUF11.
IPR013783. Ig-like_fold.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
PfamiPF13088. BNR_2. 1 hit.
PF10633. NPCBM_assoc. 1 hit.
[Graphical view]
SUPFAMiSSF50939. SSF50939. 1 hit.
TIGRFAMsiTIGR01451. B_ant_repeat. 1 hit.

Sequencei

Sequence statusi: Complete.

B8HGS5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGQAAGIGAL AVALLAGTGL PAQAAPIPST SPTAPPGAFQ ETNLAADRTA
60 70 80 90 100
NNFFYRIPAL SYLGNGVVLA AWDGRPGSAA DAPNPNSIVQ RRSTDGGRTW
110 120 130 140 150
GPVQVIAAGH VGDAAAPKYG YSDPSYVYDA EAGKVFAFFV YSKDQGFGGS
160 170 180 190 200
QFGNDDADRN VISSAVIESS DGGTTWSQPR LITGVTKPGT SKTNPVAGDV
210 220 230 240 250
RSNFASSGEG IQLKYGPYKG RLIQQYAGDI RQADGSNRIQ AYSVYSDDHG
260 270 280 290 300
ATWHKGANVG DRMDENKTVE LSDGRVLLNS RDNANQGYRK VAVSTDGGAT
310 320 330 340 350
YGPVTQDTEL PDPANNGAIA RMFPNAAQGT ADAKKLIFTN ANSKTGRENV
360 370 380 390 400
SARVSCDDGA TWPGVRTIRS GFSAYSTVTR LDEGRLGVLY EANYTDNMPF
410 420 430 440 450
AAFDDAWLNY ACAPLSVPAV TTAPGATKQV PVTVTNQEAA TLSGATVTVY
460 470 480 490 500
TPSGWSATTV PVPDVAPGAS ATVNVDLTAP ANASGPQNLN AAFTTADGRV
510 520 530 540 550
SQAAFTATVP VAPQVGLTIT GAAPDRDVAA SPYKAGDVVS YTFNVKSTAN
560 570 580 590 600
VTANSVPLSG TFEAGFLPPA PGAPSSPNCR YNNLAAGASY TCTTARHTVT
610 620 630 640 650
AEDMARGYFV PQATFSITAS ATPSLTRTVA FTGAAVALRD GLVSATITGS
660 670 680 690 700
RNDAGRDLAA QPYTAGEAFP YKFDVTNTSP LVEKVVPTAG NFSPFVPDGP
710 720 730 740 750
GNCRYNVLPA GQSYTCATPR HTVTAEEAAQ GFFIPETNWD VSAAGQTIRT
760 770 780 790 800
YGVNGGEVDL KVRDASLDGT IAAEWTDKDG DRYASAGDTV TYTYTVGNAG
810 820 830 840 850
NVPLTGVAAP AAGISEPSLA AGSSVTATRD YVLTAADITA GKLDAVSFSA
860 870 880 890 900
TGDNGTRRAT ASVSGGGIQL ELQPAQPESE PALTVQDFDG QTPPFDLKTQ
910 920 930 940 950
DKYRNGQKVV LEGLDYGQWY YVYLNKRSQR IGWLFPTTAN TVEFILPAGI
960 970
QNGRDDVVVL DKDGKQVSFD RLQVTPKG
Length:978
Mass (Da):101,708
Last modified:March 3, 2009 - v1
Checksum:iCAB770183E0FAA25
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001341 Genomic DNA. Translation: ACL41341.1.

Genome annotation databases

EnsemblBacteriaiACL41341; ACL41341; Achl_3384.
KEGGiach:Achl_3384.
PATRICi20993401. VBIArtChl38304_4063.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001341 Genomic DNA. Translation: ACL41341.1.

3D structure databases

ProteinModelPortaliB8HGS5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi452863.Achl_3384.

Protein family/group databases

CAZyiGH33. Glycoside Hydrolase Family 33.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACL41341; ACL41341; Achl_3384.
KEGGiach:Achl_3384.
PATRICi20993401. VBIArtChl38304_4063.

Phylogenomic databases

eggNOGiENOG4108478. Bacteria.
COG4409. LUCA.
HOGENOMiHOG000238241.
KOiK01186.
OMAiDRMDENK.
OrthoDBiEOG6M9F57.

Enzyme and pathway databases

BioCyciACHL452863:GH1A-3442-MONOMER.

Family and domain databases

Gene3Di2.120.10.10. 1 hit.
2.60.40.10. 1 hit.
InterProiIPR018905. A-galactase_NEW3.
IPR001434. DUF11.
IPR013783. Ig-like_fold.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
PfamiPF13088. BNR_2. 1 hit.
PF10633. NPCBM_assoc. 1 hit.
[Graphical view]
SUPFAMiSSF50939. SSF50939. 1 hit.
TIGRFAMsiTIGR01451. B_ant_repeat. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome of Arthrobacter chlorophenolicus A6."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Goltsman E., Clum A., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Jansson J., Richardson P.
    Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700700 / DSM 12829 / CIP 107037 / JCM 12360 / KCTC 9906 / NCIMB 13794 / A6Imported.

Entry informationi

Entry nameiB8HGS5_PSECP
AccessioniPrimary (citable) accession number: B8HGS5
Entry historyi
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: July 6, 2016
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.