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B8HFN6 (EFTS_ARTCA) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Elongation factor Ts
Short name=EF-Ts
Gene names
Name:tsf
Ordered Locus Names:Achl_1385
OrganismArthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) [Complete proteome] [HAMAP]
Taxonomic identifier452863 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Micrococcaceae › Arthrobacter

Protein attributes

Sequence length278 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF-Tu.GTP complex up to the GTP hydrolysis stage on the ribosome By similarity. HAMAP MF_00050

Subcellular location

Cytoplasm By similarity HAMAP MF_00050.

Sequence similarities

Belongs to the EF-Ts family.

Ontologies

Keywords
   Biological processProtein biosynthesis
   Cellular componentCytoplasm
   Molecular functionElongation factor
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functiontranslation elongation factor activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 278278Elongation factor Ts HAMAP MF_00050
PRO_1000117557

Regions

Region80 – 834Involved in Mg(2+) ion dislocation from EF-Tu By similarity

Sequences

Sequence LengthMass (Da)Tools
B8HFN6 [UniParc].

Last modified March 3, 2009. Version 1.
Checksum: 5F7A29299AC90940

FASTA27829,295
        10         20         30         40         50         60 
MANYTAADIK ALRERTGAGM MDVKKALDEA NGDAEKAIEI IRIKGLKGAT KREGRSTAEG 

        70         80         90        100        110        120 
LVAAKVSNGV GVMIEVNCET DFVAKADKFI QLADKVLAVA VESGAADLET LLATDVDGKP 

       130        140        150        160        170        180 
LSEVVIEEGA VLGEKVVVRR ISRIEGATVD AYLHKTSKDL PAQVGVLFAV DGESEAAATA 

       190        200        210        220        230        240 
AHDVAVHIAA MAPNYLTRED VPSDLVESER RIAEETAKAE GKPEAALTKI VEGRVTGFYK 

       250        260        270 
GEVLVDQAFA KDAKKSVAQI LEEAGVKGTA FARFRVGS

« Hide

References

[1]"Complete sequence of chromosome of Arthrobacter chlorophenolicus A6."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Goltsman E., Clum A., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Jansson J., Richardson P.
Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: A6 / ATCC 700700 / DSM 12829 / JCM 12360.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001341 Genomic DNA. Translation: ACL39375.1.
RefSeqYP_002487464.1. NC_011886.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGB8HFN6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7292834.
GenomeReviewsGene locus Achl_1385 in contig CP001341_GR.
KEGGach:Achl_1385.
PATRIC20989305. VBIArtChl38304_2047.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG713289.
OMAYLHGTRI.
ProtClustDBPRK09377.

Family and domain databases

HAMAPMF_00050. EF_Ts.
[Tree]
InterProIPR001816. Transl_elong_EFTs/EF1B.
IPR014039. Transl_elong_EFTs/EF1B_dimer.
IPR018101. Transl_elong_Ts_CS.
IPR009060. UBA-like.
IPR000449. UBA/transl_elong_EF1B_N.
[Graphical view]
Gene3DG3DSA:3.30.479.20. Transl_elong_EFTs/EF1B_dimer. 3 hits.
KOK02357.
PANTHERPTHR11741. Transl_elong_EFTs/EF1B. 1 hit.
PfamPF00889. EF_TS. 1 hit.
PF00627. UBA. 1 hit.
[Graphical view]
SUPFAMSSF54713. EF_TS. 1 hit.
SSF46934. UBA_like. 1 hit.
TIGRFAMsTIGR00116. Tsf. 1 hit.
PROSITEPS01126. EF_TS_1. 1 hit.
PS01127. EF_TS_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameEFTS_ARTCA
AccessionPrimary (citable) accession number: B8HFN6
Entry history
Integrated into UniProtKB/Swiss-Prot: July 28, 2009
Last sequence update: March 3, 2009
Last modified: January 25, 2012
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

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