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B8H9Z6 (B8H9Z6_ARTCA) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
L-arabinose isomerase HAMAP MF_00519
EC=5.3.1.4 HAMAP MF_00519
Gene names
Name:araA HAMAP MF_00519
Ordered Locus Names:Achl_0381
OrganismArthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) [Complete proteome] [HAMAP]
Taxonomic identifier452863 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Micrococcaceae › Arthrobacter

Protein attributes

Sequence length506 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the conversion of L-arabinose to L-ribulose By similarity. HAMAP MF_00519 SAAS SAAS003762

Catalytic activity

L-arabinose = L-ribulose. HAMAP MF_00519 SAAS SAAS003762

Cofactor

Binds 1 manganese ion per subunit By similarity. HAMAP MF_00519 SAAS SAAS003762

Pathway

Carbohydrate degradation; L-arabinose degradation via L-ribulose; D-xylulose 5-phosphate from L-arabinose (bacterial route): step 1/3. HAMAP MF_00519 SAAS SAAS003762

Sequence similarities

Belongs to the arabinose isomerase family. HAMAP MF_00519

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Metal binding3111Manganese By similarity HAMAP MF_00519
Metal binding3381Manganese By similarity HAMAP MF_00519
Metal binding3551Manganese By similarity HAMAP MF_00519
Metal binding4541Manganese By similarity HAMAP MF_00519

Sequences

Sequence LengthMass (Da)Tools
B8H9Z6 [UniParc].

Last modified March 3, 2009. Version 1.
Checksum: F9A740FAC2036725

FASTA50654,976
        10         20         30         40         50         60 
MSTAANNSLD GYEVWFLTGS QHLYGEDVLK QVAAQSQEIA TQLNSASAVP VRIVWKPVLT 

        70         80         90        100        110        120 
DSDAIRRTAL EANSDDSVIG VTAWMHTFSP AKMWIQGLDL LRKPLLHLHT QANRDLPWAD 

       130        140        150        160        170        180 
IDFDFMNLNQ AAHGDREFGY IQSRLGIARK TVVGHVSNPE VARQVGAWQR AAAGWAAVRT 

       190        200        210        220        230        240 
LKLTRFGDNM RNVAVTEGDK TEAELRFGVA VNTWSVNELA DAVHGAAESD VDALVAEYED 

       250        260        270        280        290        300 
LYEVVPELRA GAARHESLRY GARIELGLRS FLEANGSAAF TTSFEDLGAL RQLPGLAVQR 

       310        320        330        340        350        360 
LMAAGYGFGA EGDWKTAILV RAAKVMGAGL PGGASLMEDY TYHLEPGAEK ILGAHMLEVC 

       370        380        390        400        410        420 
PSLTATKPRL EIHPLGIGGK EDPVRLVFDA DASPGVVVAL SDMRDRFRLV ANAVDVVPLD 

       430        440        450        460        470        480 
QPLPNLPVAR ALWEPKPNFA TSAAAWLTAG AAHHTVLSTQ VGMDVFEDFA DIARTELLTI 

       490        500 
DEGTTIRQFK KDLNWNAAYY RLAGGL

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References

[1]"Complete sequence of chromosome of Arthrobacter chlorophenolicus A6."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Goltsman E., Clum A., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Jansson J., Richardson P.
Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: A6 / ATCC 700700 / DSM 12829 / JCM 12360.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001341 Genomic DNA. Translation: ACL38380.1.
RefSeqYP_002486469.1. NC_011886.1.

3D structure databases

ProteinModelPortalB8H9Z6.
ModBaseSearch...

Protein-protein interaction databases

STRINGB8H9Z6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7291808.
GenomeReviewsGene locus Achl_0381 in contig CP001341_GR.
KEGGach:Achl_0381.
PATRIC20987239. VBIArtChl38304_1035.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG297198.
OMAEVCPTIA.
ProtClustDBPRK02929.

Family and domain databases

HAMAPMF_00519. Arabinose_Isome.
[Tree]
InterProIPR024664. Ara_Isoase_C.
IPR004216. Fuc/Ara_isomerase_C.
IPR009015. Fucose_isomerase_N/cen.
IPR003762. Lara_isomerase.
[Graphical view]
KOK01804.
PfamPF11762. Arabinose_Iso_C. 1 hit.
PF02610. Arabinose_Isome. 1 hit.
[Graphical view]
PIRSFPIRSF001478. L-ara_isomerase. 1 hit.
ProDomPD018364. Lara_isomerase. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMSSF50443. Fuc_isomerase_C. 1 hit.
SSF53743. Fuc_isomerase_N. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB8H9Z6_ARTCA
AccessionPrimary (citable) accession number: B8H9Z6
Entry history
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: December 14, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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