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Protein
Submitted name:

DNA polymerase LigD, polymerase domain protein

Gene

Achl_1787

Organism
Arthrobacter chlorophenolicus (strain ATCC 700700 / DSM 12829 / JCM 12360 / NCIMB 13794 / A6)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciACHL452863:GH1A-1824-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase LigD, polymerase domain proteinImported
Gene namesi
Ordered Locus Names:Achl_1787Imported
OrganismiArthrobacter chlorophenolicus (strain ATCC 700700 / DSM 12829 / JCM 12360 / NCIMB 13794 / A6)Imported
Taxonomic identifieri452863 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaMicrococcalesMicrococcaceaeArthrobacter
ProteomesiUP000002505 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi452863.Achl_1787.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000244654.
OMAiTTAWWKE.
OrthoDBiEOG6FV833.

Family and domain databases

InterProiIPR002755. DNA_primase_S.
IPR014145. LigD_pol_dom.
[Graphical view]
PfamiPF01896. DNA_primase_S. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

Sequencei

Sequence statusi: Complete.

B8H7I5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASEQTTITV PGPHGEREMR ISSPSRVLFP DLGLTKLDLA RYICEVGEAF
60 70 80 90 100
IAANGDRPVS LQRYSDNIDG EMFFSKNPPR GTPDFVRSVK VVYPSARSHP
110 120 130 140 150
QLVLDEPAAA VWAVQMNTVV FHPWPSRAEN TDNPDQLRID LDPQPGTDFD
160 170 180 190 200
DAIPAAQVLR DVLAEAGLES FIKTSGNRGL HVYAPIEPVR EFLDVRHAVI
210 220 230 240 250
AAAREVERRM PDKVTTAWWK EERGERIFLD FNQANRDRTI AGAYSPRALP
260 270 280 290 300
HAPVSCPITW DELETTDPRK FTVLTVPDRL KTVGDPWAGF GEKPGSIGTL
310 320 330 340
LEWWDRDIRD GLGEMPFPPD YPKMPGEPPR VQPSRAKKQD
Length:340
Mass (Da):38,097
Last modified:March 3, 2009 - v1
Checksum:iAAA767FB950807A7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001341 Genomic DNA. Translation: ACL39765.1.
RefSeqiWP_015936985.1. NC_011886.1.

Genome annotation databases

EnsemblBacteriaiACL39765; ACL39765; Achl_1787.
KEGGiach:Achl_1787.
PATRICi20990153. VBIArtChl38304_2460.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001341 Genomic DNA. Translation: ACL39765.1.
RefSeqiWP_015936985.1. NC_011886.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi452863.Achl_1787.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACL39765; ACL39765; Achl_1787.
KEGGiach:Achl_1787.
PATRICi20990153. VBIArtChl38304_2460.

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000244654.
OMAiTTAWWKE.
OrthoDBiEOG6FV833.

Enzyme and pathway databases

BioCyciACHL452863:GH1A-1824-MONOMER.

Family and domain databases

InterProiIPR002755. DNA_primase_S.
IPR014145. LigD_pol_dom.
[Graphical view]
PfamiPF01896. DNA_primase_S. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome of Arthrobacter chlorophenolicus A6."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Goltsman E., Clum A., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Jansson J., Richardson P.
    Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700700 / DSM 12829 / JCM 12360 / NCIMB 13794 / A6Imported.

Entry informationi

Entry nameiB8H7I5_ARTCA
AccessioniPrimary (citable) accession number: B8H7I5
Entry historyi
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: July 22, 2015
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.