B8H6C9 (B8H6C9_CAUCN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP-dependent DNA ligase EMBL ACL97190.1
EC=6.5.1.1 EMBL ACL97190.1

Gene names

Ordered Locus Names:

CCNA_03725

Organism

Caulobacter crescentus (strain NA1000 / CB15N) [Complete proteome] [HAMAP]

Taxonomic identifier

565050 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Caulobacterales › Caulobacteraceae › Caulobacter › Caulobacter crescentus › Caulobacter crescentus (strain ATCC 19089 / CB15)

Protein attributes

Sequence length	541 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ACL97190.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B8H6C9 [UniParc]. Last modified March 3, 2009. Version 1. Checksum: BFF639018FC65030	FASTA	541	60,931
	10 20 30 40 50 60 MSMRAFAHLL DRLSLTSSRN AKLILIQDHL RQTPDPDRGY ALAALTGALS FNAAKPAFIR 70 80 90 100 110 120 KAIEARMDPQ LFAWSYDFVG DLAETVSLVW PAPSSRKWLG ANRPPELSEV IDALHSASRP 130 140 150 160 170 180 EVQRLIEGWL DALDPDGRWA LLKLMTGGLR VGVSSRLAKQ ACANLGGVDI GEIEEIWHAL 190 200 210 220 230 240 APPYGDLFAW LEGRSERPSP DAPGRFRPVM LAQPLDEEVD FQKLDPADYL AEWKWDGIRV 250 260 270 280 290 300 QAVSERGERR LYTRTGDDIS ASFPDVVEAL DFEGAIDGEL LVLRDGALAS FGDLQQRLNR 310 320 330 340 350 360 KTVDAKLLAA FPAGIRAYDL LMDGETDLRA LPFETRRARL EAFVASLKTS RIDLSPLQPF 370 380 390 400 410 420 STWKALAALR LEPPEGDARL SEGLMLKRRD SVYEPGRPKG PWFKWKRDPR LIDAVLMYAQ 430 440 450 460 470 480 RGHGKRSSFY SDYTFGVWRE DEDGRRTLTP VGKAYFGFTD EELKQIDKFV RDHTIERFGP 490 500 510 520 530 540 VRSVRADADV GLIFEVAFEG LQRSSRHKSG VAMRFPRINR IRWDKPAREA DELATLEAML D

References

[1]

"The genetic basis of laboratory adaptation in Caulobacter crescentus." Marks M.E., Castro-Rojas C.M., Teiling C., Du L., Kapatral V., Walunas T.L., Crosson S. J. Bacteriol. 192:3678-3688(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NA1000 / CB15N.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001340 Genomic DNA. Translation: ACL97190.1.
RefSeq	YP_002519098.1. NC_011916.1.
3D structure databases
ProteinModelPortal	B8H6C9.
SMR	B8H6C9. Positions 1-541.
ModBase	Search...
Protein-protein interaction databases
STRING	190650.CC_3610.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACL97190; ACL97190; CCNA_03725.
GeneID	7331921.
KEGG	ccs:CCNA_03725.
PATRIC	21311939. VBICauCre52860_3631.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1793.
HOGENOM	HOG000036007.
KO	K01971.
OMA	AYDLLEW.
ProtClustDB	PRK09247.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR026333. ATP_dep_DNA_lig_pp_1105_fam. IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012308. DNA_ligase_ATP-dep_N. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. PF04675. DNA_ligase_A_N. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR04120. DNA_lig_bact. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B8H6C9_CAUCN

Accession

Primary (citable) accession number: B8H6C9

Entry history

Integrated into UniProtKB/TrEMBL:	March 3, 2009
Last sequence update:	March 3, 2009
Last modified:	May 1, 2013
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)