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B8H6C9

- B8H6C9_CAUCN

UniProt

B8H6C9 - B8H6C9_CAUCN

Protein
Submitted name:

ATP-dependent DNA ligase

Gene

CCNA_03725

Organism
Caulobacter crescentus (strain NA1000 / CB15N)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 37 (01 Oct 2014)
      Sequence version 1 (03 Mar 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciCAULONA1000:CCNA_03725-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
    Gene namesi
    Ordered Locus Names:CCNA_03725Imported
    OrganismiCaulobacter crescentus (strain NA1000 / CB15N)Imported
    Taxonomic identifieri565050 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaCaulobacteralesCaulobacteraceaeCaulobacter
    ProteomesiUP000001364: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi190650.CC_3610.

    Structurei

    3D structure databases

    ProteinModelPortaliB8H6C9.
    SMRiB8H6C9. Positions 1-541.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000036007.
    KOiK01971.
    OMAiRVWLWSR.
    OrthoDBiEOG6Q8HXT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B8H6C9-1 [UniParc]FASTAAdd to Basket

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    MSMRAFAHLL DRLSLTSSRN AKLILIQDHL RQTPDPDRGY ALAALTGALS    50
    FNAAKPAFIR KAIEARMDPQ LFAWSYDFVG DLAETVSLVW PAPSSRKWLG 100
    ANRPPELSEV IDALHSASRP EVQRLIEGWL DALDPDGRWA LLKLMTGGLR 150
    VGVSSRLAKQ ACANLGGVDI GEIEEIWHAL APPYGDLFAW LEGRSERPSP 200
    DAPGRFRPVM LAQPLDEEVD FQKLDPADYL AEWKWDGIRV QAVSERGERR 250
    LYTRTGDDIS ASFPDVVEAL DFEGAIDGEL LVLRDGALAS FGDLQQRLNR 300
    KTVDAKLLAA FPAGIRAYDL LMDGETDLRA LPFETRRARL EAFVASLKTS 350
    RIDLSPLQPF STWKALAALR LEPPEGDARL SEGLMLKRRD SVYEPGRPKG 400
    PWFKWKRDPR LIDAVLMYAQ RGHGKRSSFY SDYTFGVWRE DEDGRRTLTP 450
    VGKAYFGFTD EELKQIDKFV RDHTIERFGP VRSVRADADV GLIFEVAFEG 500
    LQRSSRHKSG VAMRFPRINR IRWDKPAREA DELATLEAML D 541
    Length:541
    Mass (Da):60,931
    Last modified:March 3, 2009 - v1
    Checksum:iBFF639018FC65030
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001340 Genomic DNA. Translation: ACL97190.1.
    RefSeqiYP_002519098.1. NC_011916.1.

    Genome annotation databases

    EnsemblBacteriaiACL97190; ACL97190; CCNA_03725.
    GeneIDi7331921.
    KEGGiccs:CCNA_03725.
    PATRICi21311939. VBICauCre52860_3631.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001340 Genomic DNA. Translation: ACL97190.1 .
    RefSeqi YP_002519098.1. NC_011916.1.

    3D structure databases

    ProteinModelPortali B8H6C9.
    SMRi B8H6C9. Positions 1-541.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 190650.CC_3610.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACL97190 ; ACL97190 ; CCNA_03725 .
    GeneIDi 7331921.
    KEGGi ccs:CCNA_03725.
    PATRICi 21311939. VBICauCre52860_3631.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000036007.
    KOi K01971.
    OMAi RVWLWSR.
    OrthoDBi EOG6Q8HXT.

    Enzyme and pathway databases

    BioCyci CAULONA1000:CCNA_03725-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The genetic basis of laboratory adaptation in Caulobacter crescentus."
      Marks M.E., Castro-Rojas C.M., Teiling C., Du L., Kapatral V., Walunas T.L., Crosson S.
      J. Bacteriol. 192:3678-3688(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NA1000 / CB15NImported.

    Entry informationi

    Entry nameiB8H6C9_CAUCN
    AccessioniPrimary (citable) accession number: B8H6C9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 3, 2009
    Last sequence update: March 3, 2009
    Last modified: October 1, 2014
    This is version 37 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3