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B8H6C9 (B8H6C9_CAUCN) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length541 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
B8H6C9 [UniParc].

Last modified March 3, 2009. Version 1.
Checksum: BFF639018FC65030

FASTA54160,931
        10         20         30         40         50         60 
MSMRAFAHLL DRLSLTSSRN AKLILIQDHL RQTPDPDRGY ALAALTGALS FNAAKPAFIR 

        70         80         90        100        110        120 
KAIEARMDPQ LFAWSYDFVG DLAETVSLVW PAPSSRKWLG ANRPPELSEV IDALHSASRP 

       130        140        150        160        170        180 
EVQRLIEGWL DALDPDGRWA LLKLMTGGLR VGVSSRLAKQ ACANLGGVDI GEIEEIWHAL 

       190        200        210        220        230        240 
APPYGDLFAW LEGRSERPSP DAPGRFRPVM LAQPLDEEVD FQKLDPADYL AEWKWDGIRV 

       250        260        270        280        290        300 
QAVSERGERR LYTRTGDDIS ASFPDVVEAL DFEGAIDGEL LVLRDGALAS FGDLQQRLNR 

       310        320        330        340        350        360 
KTVDAKLLAA FPAGIRAYDL LMDGETDLRA LPFETRRARL EAFVASLKTS RIDLSPLQPF 

       370        380        390        400        410        420 
STWKALAALR LEPPEGDARL SEGLMLKRRD SVYEPGRPKG PWFKWKRDPR LIDAVLMYAQ 

       430        440        450        460        470        480 
RGHGKRSSFY SDYTFGVWRE DEDGRRTLTP VGKAYFGFTD EELKQIDKFV RDHTIERFGP 

       490        500        510        520        530        540 
VRSVRADADV GLIFEVAFEG LQRSSRHKSG VAMRFPRINR IRWDKPAREA DELATLEAML 


D 

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References

[1]"The genetic basis of laboratory adaptation in Caulobacter crescentus."
Marks M.E., Castro-Rojas C.M., Teiling C., Du L., Kapatral V., Walunas T.L., Crosson S.
J. Bacteriol. 192:3678-3688(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NA1000 / CB15N.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001340 Genomic DNA. Translation: ACL97190.1.
RefSeqYP_002519098.1. NC_011916.1.

3D structure databases

ProteinModelPortalB8H6C9.
SMRB8H6C9. Positions 1-541.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING190650.CC_3610.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACL97190; ACL97190; CCNA_03725.
GeneID7331921.
KEGGccs:CCNA_03725.
PATRIC21311939. VBICauCre52860_3631.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000036007.
KOK01971.
OMAGQPYPFF.
OrthoDBEOG6Q8HXT.
ProtClustDBPRK09247.

Enzyme and pathway databases

BioCycCAULONA1000:CCNA_03725-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB8H6C9_CAUCN
AccessionPrimary (citable) accession number: B8H6C9
Entry history
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: December 11, 2013
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)