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B8GPC8 (B8GPC8_THISH) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Pseudouridine synthase RuleBase RU003887
EC=5.4.99.- RuleBase RU003887
Gene names
Ordered Locus Names:Tgr7_2977
OrganismThioalkalivibrio sp. (strain HL-EbGR7) [Complete proteome] [HAMAP] EMBL ACL74048.1
Taxonomic identifier396588 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Chromatiales › Ectothiorhodospiraceae › Thioalkalivibrio ›

Protein attributes

Sequence length180 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the pseudouridine synthase rsuA family. RuleBase RU003887

Ontologies

Keywords
   Molecular functionIsomerase SAAS SAAS000748 RuleBase RU003887
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processpseudouridine synthesis

Inferred from electronic annotation. Source: InterPro

   Molecular_functionRNA binding

Inferred from electronic annotation. Source: InterPro

pseudouridine synthase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B8GPC8 [UniParc].

Last modified March 3, 2009. Version 1.
Checksum: 3BC7EDD8D1E398CF

FASTA18020,222
        10         20         30         40         50         60 
MPRIILLNKP FDVLCQFTDR EGRRTLAVYV PEPGVYAAGR LDRDSEGLVV LTDDGRLQAR 

        70         80         90        100        110        120 
ISDPKHKMSK TYWVQVEGVP DAQALKALAE GVELKDGLTL PARVKIIDEP PGLWPRDPPI 

       130        140        150        160        170        180 
RVRQSIPTSW LELTISEGRN RQVRRMTAAV GHPTLRLIRY RVGSWTLDGL GPGERLVLEI

« Hide

References

[1]"Complete genome sequence of 'Thioalkalivibrio sulfidophilus' HL-EbGr7."
Muyzer G., Sorokin D.Y., Mavromatis K., Lapidus A., Clum A., Ivanova N., Pati A., d'Haeseleer P., Woyke T., Kyrpides N.C.
Stand. Genomic Sci. 4:23-35(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: HL-EbGR7.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001339 Genomic DNA. Translation: ACL74048.1.
RefSeqYP_002515035.1. NC_011901.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING396588.Tgr7_2977.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACL74048; ACL74048; Tgr7_2977.
GeneID7318274.
KEGGtgr:Tgr7_2977.
PATRIC23965450. VBIThiSp19295_2944.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1187.
KOK06181.
OMATWIELSI.

Family and domain databases

InterProIPR020103. PsdUridine_synth_cat_dom.
IPR000748. PsdUridine_synth_RsuA/RluB/E/F.
IPR018496. PsdUridine_synth_RsuA/RluB_CS.
IPR006145. PsdUridine_synth_RsuA/RluD.
[Graphical view]
PfamPF00849. PseudoU_synth_2. 1 hit.
[Graphical view]
SUPFAMSSF55120. PsdUridine_synth_cat_dom. 1 hit.
TIGRFAMsTIGR00093. TIGR00093. 1 hit.
PROSITEPS01149. PSI_RSU. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB8GPC8_THISH
AccessionPrimary (citable) accession number: B8GPC8
Entry history
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: May 1, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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