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B8GNA4 (GLGA_THISH) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:Tgr7_0874
OrganismThioalkalivibrio sp. (strain HL-EbGR7) [Complete proteome] [HAMAP]
Taxonomic identifier396588 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaChromatialesEctothiorhodospiraceaeThioalkalivibrio

Protein attributes

Sequence length483 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 483483Glycogen synthase HAMAP-Rule MF_00484
PRO_1000190090

Sites

Binding site151ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
B8GNA4 [UniParc].

Last modified March 3, 2009. Version 1.
Checksum: DBAC73728CB03BAC

FASTA48352,854
        10         20         30         40         50         60 
MRILFASSEV HPLIKTGGLA DVSASLPQAL KRLRQDVRVV MPAYGSVLDK AGDLEQVTTL 

        70         80         90        100        110        120 
QLPGFPGDTV TLLSGTLPGS RVPLWLVDAP RLFRRAGDPY RAPDGHDWQD NYLRFGLFAR 

       130        140        150        160        170        180 
LIEHLALDRA GLDWRPDVVH CNDWQAGLAP LMLSMHESRP ATVFTIHNLA YQGLFPRHAF 

       190        200        210        220        230        240 
DALNLPPQLW HYQGLEFHGK LSFIKGGIGF ADHITTVSPS YAREILTPQQ GFGLDGLLNH 

       250        260        270        280        290        300 
RAGVLTGILN GVDYREWDPG KDRHLVARYS ADDLSGKARC KAALQHHFKL PCHSGIPLLG 

       310        320        330        340        350        360 
HVGRMVAQKG VDLLLKAAEP LLAAGEAQLV VVGSGDATLE QTARSLAERY PEHMGLHIGY 

       370        380        390        400        410        420 
SEPLAHQLEA GADIFVMPSR FEPCGLNQMY SLRYGTVPVV RNTGGLADTV VDADPAHLAA 

       430        440        450        460        470        480 
RDATGIQFDE ATPQALADAL ARALALYHDP ACWKRLMQAG MAQDFSWGRS AEAYLDLYKD 


LVS 

« Hide

References

[1]"Complete genome sequence of 'Thioalkalivibrio sulfidophilus' HL-EbGr7."
Muyzer G., Sorokin D.Y., Mavromatis K., Lapidus A., Clum A., Ivanova N., Pati A., d'Haeseleer P., Woyke T., Kyrpides N.C.
Stand. Genomic Sci. 4:23-35(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: HL-EbGR7.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001339 Genomic DNA. Translation: ACL71965.1.
RefSeqYP_002512952.1. NC_011901.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING396588.Tgr7_0874.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACL71965; ACL71965; Tgr7_0874.
GeneID7315897.
KEGGtgr:Tgr7_0874.
PATRIC23961224. VBIThiSp19295_0871.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
KOK00703.
OMAPYHDESQ.
OrthoDBEOG6JTC6Z.

Enzyme and pathway databases

BioCycTSUL396588:GH5B-877-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_THISH
AccessionPrimary (citable) accession number: B8GNA4
Entry history
Integrated into UniProtKB/Swiss-Prot: July 28, 2009
Last sequence update: March 3, 2009
Last modified: May 14, 2014
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways