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Protein
Submitted name:

Daunorubicin resistance ABC transporter, inner membrane subunit B

Gene

Mpal_1126

Organism
Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Daunorubicin resistance ABC transporter, inner membrane subunit BImported
Gene namesi
Ordered Locus Names:Mpal_1126Imported
OrganismiMethanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c)Imported
Taxonomic identifieri521011 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanomicrobialesMethanoregulaceaeMethanosphaerula
Proteomesi
  • UP000002457 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei29 – 49HelicalSequence analysisAdd BLAST21
Transmembranei55 – 75HelicalSequence analysisAdd BLAST21
Transmembranei96 – 112HelicalSequence analysisAdd BLAST17
Transmembranei118 – 136HelicalSequence analysisAdd BLAST19
Transmembranei143 – 166HelicalSequence analysisAdd BLAST24
Transmembranei172 – 193HelicalSequence analysisAdd BLAST22
Transmembranei226 – 248HelicalSequence analysisAdd BLAST23

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi521011.Mpal_1126.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini11 – 220ABC2_membraneInterPro annotationAdd BLAST210

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiarCOG01467. Archaea.
COG0842. LUCA.
HOGENOMiHOG000223008.
KOiK01992.
OMAiRFLHQRE.

Family and domain databases

InterProiIPR013525. ABC_2_trans.
IPR000412. ABC_2_transport.
IPR005942. Daunbcin-R_ABC-transpt.
[Graphical view]
PfamiPF01061. ABC2_membrane. 1 hit.
[Graphical view]
PIRSFiPIRSF006648. DrrB. 1 hit.
PRINTSiPR00164. ABC2TRNSPORT.
TIGRFAMsiTIGR01247. drrB. 1 hit.
PROSITEiPS51012. ABC_TM2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B8GH64-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRTLRKQLKA TYTIWLRELT KFYRERTQFA STMVTPVLWL IVFGGGMGIN
60 70 80 90 100
LRTGAINTSY NAFIFPGIIG MTLLFTSMRS GISIIWDREF GFLKEILVAP
110 120 130 140 150
ISWTSIVMGK ALGGGTNAMI QGTILLLLSV FVGISLTPLQ IVLVLPLMLL
160 170 180 190 200
ISLGFDGFGL SIASVIESYE GFQTIMSFVI MPTFFLSGAL FPLTNAPRWL
210 220 230 240 250
QIVSDLDPMT YGVDAMRQVI LRGGQFPMGL DLCIMIAFTV IMLVFTSYRF

TIKN
Length:254
Mass (Da):28,261
Last modified:March 3, 2009 - v1
Checksum:i797596AE4C19DE71
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001338 Genomic DNA. Translation: ACL16469.1.
RefSeqiWP_012617788.1. NC_011832.1.

Genome annotation databases

EnsemblBacteriaiACL16469; ACL16469; Mpal_1126.
GeneIDi7271043.
KEGGimpl:Mpal_1126.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001338 Genomic DNA. Translation: ACL16469.1.
RefSeqiWP_012617788.1. NC_011832.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi521011.Mpal_1126.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACL16469; ACL16469; Mpal_1126.
GeneIDi7271043.
KEGGimpl:Mpal_1126.

Phylogenomic databases

eggNOGiarCOG01467. Archaea.
COG0842. LUCA.
HOGENOMiHOG000223008.
KOiK01992.
OMAiRFLHQRE.

Family and domain databases

InterProiIPR013525. ABC_2_trans.
IPR000412. ABC_2_transport.
IPR005942. Daunbcin-R_ABC-transpt.
[Graphical view]
PfamiPF01061. ABC2_membrane. 1 hit.
[Graphical view]
PIRSFiPIRSF006648. DrrB. 1 hit.
PRINTSiPR00164. ABC2TRNSPORT.
TIGRFAMsiTIGR01247. drrB. 1 hit.
PROSITEiPS51012. ABC_TM2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiB8GH64_METPE
AccessioniPrimary (citable) accession number: B8GH64
Entry historyi
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: November 2, 2016
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.