B8GFA6 (B8GFA6_METPE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Ribose-5-phosphate isomerase A HAMAP MF_00170
EC=5.3.1.6 HAMAP MF_00170

Alternative name(s):
Phosphoriboisomerase A HAMAP MF_00170

Gene names

Name:	rpiA HAMAP MF_00170
Ordered Locus Names:	Mpal_0583

Organism

Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) [Complete proteome] [HAMAP]

Taxonomic identifier

521011 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanomicrobia › Methanomicrobiales › Genera incertae sedis › Methanosphaerula

Protein attributes

Sequence length	237 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	D-ribose 5-phosphate = D-ribulose 5-phosphate. HAMAP MF_00170
Pathway	Carbohydrate degradation; pentose phosphate pathway; D-ribose 5-phosphate from D-ribulose 5-phosphate (non-oxidative stage): step 1/1. HAMAP MF_00170
Sequence similarities	Belongs to the ribose 5-phosphate isomerase family. HAMAP MF_00170

Ontologies

Keywords
Molecular function	Isomerase HAMAP MF_00170 EMBL ACL15954.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	pentose-phosphate shunt, non-oxidative branch Inferred from electronic annotation. Source: HAMAP
Molecular function	ribose-5-phosphate isomerase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B8GFA6 [UniParc]. Last modified March 3, 2009. Version 1. Checksum: 002FB6B83221B106	FASTA	237	24,640
	10 20 30 40 50 60 MVDASAQAVG KREAGYRAAD MVADGMVVGL GTGSTVFFAM ERLAARIREG LVITGIPTSF 70 80 90 100 110 120 QTAIRARGCG IPLATLNDYP VIDLAIDGAD QVDPGFALIK GRGAAQTQEK CVAFAAKSLV 130 140 150 160 170 180 IVADPSKLTR KLDAVVPIEV LSSAYVPVIR YLKTIGGVPV LREGIKKDGP VITDNGNMVI 190 200 210 220 230 DCGFGTIGDP TALDIHLSSI PGVVTCGLFT TFADKTTVVV GDSNGCQVLS RNGQFPL

References

[1]

"Complete sequence of Candidatus Methanosphaerula E1-9c." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kiss H., Lu M., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G.O., Zinder S. Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-1556 / DSM 19958 / E1-9c.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001338 Genomic DNA. Translation: ACL15954.1.
RefSeq	YP_002465677.1. NC_011832.1.
3D structure databases
ProteinModelPortal	B8GFA6.
ModBase	Search...
Protein-protein interaction databases
STRING	B8GFA6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7270167.
GenomeReviews	Gene locus Mpal_0583 in contig CP001338_GR.
KEGG	mpl:Mpal_0583.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG515603.
OMA	GGDPEYR.
ProtClustDB	CLSK964674.
Family and domain databases
HAMAP	MF_00170. Rib_5P_isom_A. [Tree]
InterPro	IPR004788. Ribose5P_isomerase_typA. IPR020672. Ribose5P_isomerase_typA_subgr. [Graphical view]
KO	K01807.
PANTHER	PTHR11934. RpiA. 1 hit.
Pfam	PF06026. Rib_5-P_isom_A. 1 hit. [Graphical view]
TIGRFAMs	TIGR00021. RpiA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B8GFA6_METPE

Accession

Primary (citable) accession number: B8GFA6

Entry history

Integrated into UniProtKB/TrEMBL:	March 3, 2009
Last sequence update:	March 3, 2009
Last modified:	November 16, 2011
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)