B8GE46 (B8GE46_METPE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA polymerase II, large subunit DP2 EMBL ACL17547.1
EC=2.7.7.7 EMBL ACL17547.1

Gene names

Ordered Locus Names:

Mpal_2254

Organism

Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) [Complete proteome] [HAMAP]

Taxonomic identifier

521011 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanomicrobia › Methanomicrobiales › Genera incertae sedis › Methanosphaerula

Protein attributes

Sequence length	1283 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

Ontologies

Keywords
Molecular function	Nucleotidyltransferase EMBL ACL17547.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	DNA catabolic process Inferred from electronic annotation. Source: InterPro DNA replication Inferred from electronic annotation. Source: InterPro intein-mediated protein splicing Inferred from electronic annotation. Source: InterPro
Molecular function	DNA binding Inferred from electronic annotation. Source: InterPro DNA-directed DNA polymerase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B8GE46 [UniParc]. Last modified March 3, 2009. Version 1. Checksum: 7487B6C764FB8353	FASTA	1,283	141,900
	10 20 30 40 50 60 MMAAYHKRLQ DGLYEAISVA EQARALGIDP KTRVEIPIAN DLADRVEALL GITGVAARIR 70 80 90 100 110 120 ELEQTMSREE ASLRIGDDFV AKRFGETTRE EILDHAIRTG MALLTEGVVA APTEGIGNIC 130 140 150 160 170 180 LGRNDDGTDY LKIYYAGPIR SAGGTAQALS VLVGDYVRQQ LGIGRFIPRP EEVERYIEEI 190 200 210 220 230 240 KQYNSIMSLQ YLPSEKEIRT IVSNCPVCID GEATEQEEVS GYRNLERVET NVVRGGMALV 250 260 270 280 290 300 VAEGMALKAP KIQKNVRKMK MEGWEWLDEL ISGTVKTGDD DDEIGVKPKD KYIRDLIGGR 310 320 330 340 350 360 PVFSYPMRKG GFRLRYGRAR NTGFAAAGLH PATMHLLGDF LAVGTQMKVE RPGKAAGIVP 370 380 390 400 410 420 VDTIEGPTVR LVNGDVLRVD DLALAHQISG SVERILDVGE MLVSYGEFLE NNHLLVPCGY 430 440 450 460 470 480 CDEWWQLESN GASRPTDETE AILLALDGGY LHPEYTQMWD DITPEQLITL SDWVSRTGAV 490 500 510 520 530 540 TRAGLVLPCE AEGKAILEEL LVPHTVRDDR IIISRHLVLI AALGLDLHLQ RRGVWADAPT 550 560 570 580 590 600 DGHNALSLAC HLAGFAMRQK GGTRIGGRMG RPGKSKAREM KPPPHALFPV GEAGGARRSF 610 620 630 640 650 660 QEASTYAPER NRDGGVITAE VGERRCPACK TITYKNRCTC GAHTEPVFRC PKCNIEINAD 670 680 690 700 710 720 RCPRCDGGTV CTQTVSINVK NDYATVLEEL GLRTGMVPLV KGVKGLISRE RVVEDLAKGV 730 740 750 760 770 780 LRARHSLYVF KDGTVRYDMI DLPLTHIRTD ECGVTPEQLV ALGYTQDVYG VPLTDPTQVV 790 800 810 820 830 840 ELRPQDILVS EKCAVWLLEV TAFIDDLLEK VYHLPRFYNV TSRADLIGHL VIGLAPHTSA 850 860 870 880 890 900 GVLARLVGFT KANVGYAHPF FHAAKRRNCF YGDTVIEVYD YRSWTKVPIR QFVLENFDLS 910 920 930 940 950 960 NPGLDHFGTF YSDPKRSFLT RSVDTQGTMH LKKITSVSVH RAPPALIRFG TSRGKVVSVT 970 980 990 1000 1010 1020 PEHAMLIWDV DYLKKIRADE VKIGDAVPVY EGGQVLADRI TELDIVPCPD DRVFCLTVAD 1030 1040 1050 1060 1070 1080 DHTLVADGIF TGQCDGDEDC VMMLLDGLIN FSRSFLPETR GGSMDAPLVL TSRLDPAEID 1090 1100 1110 1120 1130 1140 KESLNVDVGS SYPLEFYLAA QQYTHPKDLD ALIDRVERRL GTPAQLEGFM FTHDTSNISE 1150 1160 1170 1180 1190 1200 GPLESTYTIL ESMVDKLGAE LDLAEKIRAV DADDVAERVL KTHFMPDLMG NLSAFSKQKF 1210 1220 1230 1240 1250 1260 RCTRCGSKYR RMPLAGRCIK CGNTIIPTVH EGSVKKYLEI SKGICNKYAV SEYTRQRVEV 1270 1280 LDMAIQSTFG AAKEQQLGLA DFM

References

[1]

"Complete sequence of Candidatus Methanosphaerula E1-9c." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kiss H., Lu M., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G.O., Zinder S. Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-1556 / DSM 19958 / E1-9c.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001338 Genomic DNA. Translation: ACL17547.1.
RefSeq	YP_002467270.1. NC_011832.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	B8GE46.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7272551.
GenomeReviews	Gene locus Mpal_2254 in contig CP001338_GR.
KEGG	mpl:Mpal_2254.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG497074.
OMA	NCDGDED.
ProtClustDB	PRK14714.
Family and domain databases
HAMAP	MF_00324. DNApol_II_L_arch. [Tree]
InterPro	IPR003586. Hedgehog_hint_C. IPR003587. Hedgehog_hint_N. IPR006141. Intein_splice_site. IPR004475. PolC_DP2. IPR016033. PolC_DP2_N. [Graphical view]
KO	K02322.
Pfam	PF03833. PolC_DP2. 1 hit. [Graphical view]
PIRSF	PIRSF016275. PolC_DP2. 1 hit.
SMART	SM00305. HintC. 1 hit. SM00306. HintN. 1 hit. [Graphical view]
TIGRFAMs	TIGR01443. Intein_Cterm. 1 hit. TIGR00354. PolC. 1 hit.
PROSITE	PS50817. INTEIN_N_TER. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B8GE46_METPE

Accession

Primary (citable) accession number: B8GE46

Entry history

Integrated into UniProtKB/TrEMBL:	March 3, 2009
Last sequence update:	March 3, 2009
Last modified:	December 14, 2011
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)