B8G3Y9 (B8G3Y9_CHLAD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alanine racemase EMBL ACL25391.1

Gene names

Ordered Locus Names:

Cagg_2520

Organism

Chloroflexus aggregans (strain MD-66 / DSM 9485) [Complete proteome] [HAMAP] EMBL ACL25391.1

Taxonomic identifier

326427 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Chloroflexi › Chloroflexi › Chloroflexales › Chloroflexaceae › Chloroflexus › Chloroflexus aggregans

Protein attributes

Sequence length	811 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-alanine = D-alanine. SAAS SAAS020622
Cofactor	Pyridoxal phosphate By similarity. SAAS SAAS020622
Pathway	Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS020622
Molecular function	Isomerase SAAS SAAS020622
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	D-alanine biosynthetic process Inferred from electronic annotation. Source: UniProtKB-UniPathway cell division Inferred from electronic annotation. Source: InterPro regulation of cell shape Inferred from electronic annotation. Source: InterPro
Cellular_component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity Inferred from electronic annotation. Source: InterPro alanine racemase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B8G3Y9 [UniParc]. Last modified March 3, 2009. Version 1. Checksum: 1EE2E58CFBA6A3BB	FASTA	811	85,740
	10 20 30 40 50 60 MTITLAELLD AGGTLVGPSV TDTFTDWSYD SRLTAPGECF IAIRTARADG HDYIPAALAA 70 80 90 100 110 120 GARGVLCRRP PHAADNATVI VCSDPQTVLL RWASNRLRAL HPTVVAVTGG IGKTLARRAI 130 140 150 160 170 180 AAVLTQLAPT FQSRRNFNSL LGLPIALARL RAHDRYAVLE FAGEHLSPLV AAFPPHLAVI 190 200 210 220 230 240 TPGADPQTVT LLQQHGVRVL SAAAADCYTI AGEFAIRATD ISFRRDGVTF IARGPGLELP 250 260 270 280 290 300 IFTPLLGPPG VSAALAAIAV GLSYHMSPEP IQQALTRLEP PAGRLRPLRG KNGEMIIDDS 310 320 330 340 350 360 FNATLPAMVA ALQTLAALPA QRRIAVLGTP AELPAIDPTP MLSDLGGQAA RSADYLVLKG 370 380 390 400 410 420 TGAATMVHAA RLVKPTIPIH VVDTNTAAQM SLPSDRGAGD LVLVSGGAGE RLEQVVAPLL 430 440 450 460 470 480 ADDELPTDCL VRQEPAWRSV RIGDPGRPTW VHLDLTAIAD NVRALRHHTG VPLMVVLKGD 490 500 510 520 530 540 GYGHGAARVA RAALAAGAEM VAVATVGEGR SLRAQGISAP ILVLGYTPPW QVAEAIRLDL 550 560 570 580 590 600 MVTLFDDDTA QALSAAALEL GRPARVHIKV DTGMARLGVS PAAVGPFLYY LRDLPGIEPV 610 620 630 640 650 660 GLYTHFARAD EADPEPTKHQ LQLLQTVLAE ITAAGLRPPL VHAANSAATL RFPMTYFDMV 670 680 690 700 710 720 RPGLACYGIA PSPVVPLLPG MHPALSFYSE VAQVREHPAG TPISYGGAYV TSRPSRIATI 730 740 750 760 770 780 PVGYADGLRR SPAWREVLIR GRRAPIVGRI CMDYAMVDVT DIPGVQRGDP VTIIGRQGEE 790 800 810 VIGVDEIAGW LGTISYEVLT GILPRVPREI G

References

[1]

"Complete sequence of Chloroflexus aggregans DSM 9485." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Foster B., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Bryant D.A., Richardson P. Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: MD-66 / DSM 9485.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001337 Genomic DNA. Translation: ACL25391.1.
RefSeq	YP_002463827.1. NC_011831.1.
3D structure databases
ProteinModelPortal	B8G3Y9.
ModBase	Search...
Protein-protein interaction databases
STRING	326427.Cagg_2520.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACL25391; ACL25391; Cagg_2520.
GeneID	7269366.
KEGG	cag:Cagg_2520.
PATRIC	21407671. VBIChlAgg85409_2610.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0770.
HOGENOM	HOG000287568.
KO	K01775.
OMA	SYNSQIG.
ProtClustDB	CLSK974491.
Enzyme and pathway databases
BioCyc	CAGG326427:GHS8-2555-MONOMER.
UniPathway	UPA00042; UER00497.
Family and domain databases
Gene3D	2.40.37.10. 1 hit. 3.40.1190.10. 2 hits. 3.90.190.20. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR020622. Ala_racemase_pyridoxalP-BS. IPR004101. Mur_ligase_C. IPR013221. Mur_ligase_cen. IPR000713. Mur_ligase_N. IPR005863. UDP-N-AcMur-pentapeptide_synth. [Graphical view]
PANTHER	PTHR23135:SF3. PTHR23135:SF3. 1 hit.
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. PF01225. Mur_ligase. 1 hit. PF02875. Mur_ligase_C. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF53244. Mur_ligase_C. 1 hit. SSF53623. Mur_ligase_cen. 1 hit. SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
PROSITE	PS00395. ALANINE_RACEMASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B8G3Y9_CHLAD

Accession

Primary (citable) accession number: B8G3Y9

Entry history

Integrated into UniProtKB/TrEMBL:	March 3, 2009
Last sequence update:	March 3, 2009
Last modified:	May 1, 2013
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)