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Protein

16S rRNA (cytosine(967)-C(5))-methyltransferase

Gene

Dhaf_3851

Organism
Desulfitobacterium hafniense (strain DCB-2 / DSM 10664)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.SAAS annotation

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation

Catalytic activityi

S-adenosyl-L-methionine + cytosine(967) in 16S rRNA = S-adenosyl-L-homocysteine + 5-methylcytosine(967) in 16S rRNA.SAAS annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei285S-adenosyl-L-methioninePROSITE-ProRule annotation1
Binding sitei312S-adenosyl-L-methioninePROSITE-ProRule annotation1
Binding sitei330S-adenosyl-L-methioninePROSITE-ProRule annotation1
Active sitei383NucleophilePROSITE-ProRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionMethyltransferasePROSITE-ProRule annotationSAAS annotation, RNA-bindingPROSITE-ProRule annotationSAAS annotation, Transferase
Biological processrRNA processingSAAS annotation
LigandS-adenosyl-L-methioninePROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Recommended name:
16S rRNA (cytosine(967)-C(5))-methyltransferaseSAAS annotation (EC:2.1.1.176SAAS annotation)
Gene namesi
Ordered Locus Names:Dhaf_3851Imported
OrganismiDesulfitobacterium hafniense (strain DCB-2 / DSM 10664)Imported
Taxonomic identifieri272564 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesPeptococcaceaeDesulfitobacterium
Proteomesi
  • UP000007726 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm SAAS annotation

GO - Cellular componenti

Keywords - Cellular componenti

CytoplasmSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliB8FS79
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini171 – 451SAM_MT_RSMB_NOPInterPro annotationAdd BLAST281

Sequence similaritiesi

Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.PROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

HOGENOMiHOG000037300
KOiK03500
OMAiLRVNRQH

Family and domain databases

Gene3Di1.10.940.10, 1 hit
InterProiView protein in InterPro
IPR001678 MeTrfase_RsmB/NOP2
IPR035926 NusB-like_sf
IPR006027 NusB_RsmB_TIM44
IPR023267 RCMT
IPR004573 rRNA_ssu_MeTfrase_B
IPR029063 SAM-dependent_MTases
PfamiView protein in Pfam
PF01189 Methyltr_RsmB-F, 1 hit
PF01029 NusB, 1 hit
PRINTSiPR02008 RCMTFAMILY
SUPFAMiSSF48013 SSF48013, 1 hit
SSF53335 SSF53335, 1 hit
TIGRFAMsiTIGR00563 rsmB, 1 hit
PROSITEiView protein in PROSITE
PS51686 SAM_MT_RSMB_NOP, 1 hit

Sequencei

Sequence statusi: Complete.

B8FS79-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDKITSRALA VQILRRIEEE KAYANLVMQK ALHDLSDPRE RQLATLLVNG
60 70 80 90 100
TLKHRLTLDY ALRRHLRKPL SQLPHEVRWI LRISALQILY LSRIPAAVAI
110 120 130 140 150
NEGVELTKKQ QGKYTSLVNS VLRRVLETGW DMLWPSKEKE PVRFLSLRYS
160 170 180 190 200
HPEWMVKRWL KRYGMADTEA LCQANNEPAP VWIRTNTLKI SRADLQARLE
210 220 230 240 250
GEGVKVTIGE RVPESLVIED FGSLDKLPSF QEGHFTVQDE SSQLIAHVLN
260 270 280 290 300
PQAGQKVLDA CGAPGGKTTH LAQRMENQGE ILAFDIHPHK VKLIEDLAAR
310 320 330 340 350
LGITIIRAQA GDARELAGVK DASCHKVLVD APCSGLGVLR RRADMRWHKE
360 370 380 390 400
EDEIKTLPAL QLAILERAAQ CVAAGGELVY STCTIEPEEN FEVVKAFRAN
410 420 430 440 450
HPEFITVDFS GELPYSLASE QDRKQAAKGF LQILPHKQGM DGFFLAKFRR

VEV
Length:453
Mass (Da):51,096
Last modified:March 3, 2009 - v1
Checksum:iF0865F7CD2D0C1CB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001336 Genomic DNA Translation: ACL21867.1
RefSeqiWP_005811812.1, NC_011830.1

Genome annotation databases

EnsemblBacteriaiACL21867; ACL21867; Dhaf_3851
KEGGidhd:Dhaf_3851

Entry informationi

Entry nameiB8FS79_DESHD
AccessioniPrimary (citable) accession number: B8FS79
Entry historyiIntegrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: May 23, 2018
This is version 67 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

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