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B8FPL2 (B8FPL2_DESHD) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=6.1.1.2 EMBL ACL21444.1
Gene names
Ordered Locus Names:Dhaf_3426 EMBL ACL21444.1
OrganismDesulfitobacterium hafniense (strain DCB-2 / DSM 10664) [Complete proteome] [HAMAP] EMBL ACL21444.1
Taxonomic identifier272564 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesPeptococcaceaeDesulfitobacterium

Protein attributes

Sequence length326 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-I aminoacyl-tRNA synthetase family. RuleBase RU003489

Sequences

Sequence LengthMass (Da)Tools
B8FPL2 [UniParc].

Last modified March 3, 2009. Version 1.
Checksum: C6E1548EB762E03A

FASTA32636,800
        10         20         30         40         50         60 
MKGRIFSGMR PTGSLHIGHL SVIQNWAALQ SEYQSYYGIV DQHALTTGYE DGLDFGVLIR 

        70         80         90        100        110        120 
EIALDWLSVG IDPEQSAIFV QSHIKEHAEL HLLLSMITPL SWLERVPTYK DQMQQLGKEG 

       130        140        150        160        170        180 
GKDISTYGFL GYPLLMAADI LVYKADTVPV GEDQIPHVEL CREIARRFNH LYGPVFPEPK 

       190        200        210        220        230        240 
ALIGKVPLLP GVDGRKMSKS YNNTISLTAS TAEIKERVQQ MVTDPARLRK DDPGHPEVCI 

       250        260        270        280        290        300 
VYKFHEVYTP EVAEVEENCR GGKIGCVACK RHLAENLDKL LSPFRERRAL WEEPGKVERV 

       310        320 
LEQGAEQARQ VTQETMKEVR HVMGLR 

« Hide

References

[1]"Genome sequence of Desulfitobacterium hafniense DCB-2, a Gram-positive anaerobe capable of dehalogenation and metal reduction."
Kim S.H., Harzman C., Davis J.K., Hutcheson R., Broderick J.B., Marsh T.L., Tiedje J.M.
BMC Microbiol. 12:21-21(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DCB-2 / DSM 10664.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001336 Genomic DNA. Translation: ACL21444.1.
RefSeqYP_002459880.1. NC_011830.1.

3D structure databases

ProteinModelPortalB8FPL2.
SMRB8FPL2. Positions 3-325.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING272564.Dhaf_3426.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACL21444; ACL21444; Dhaf_3426.
GeneID7260444.
KEGGdhd:Dhaf_3426.
PATRIC21664825. VBIDesHaf15223_3571.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0180.
HOGENOMHOG000059941.
KOK01867.
OMAWEMLIDW.
OrthoDBEOG686NJQ.

Enzyme and pathway databases

BioCycDHAF272564:GCV8-3500-MONOMER.

Family and domain databases

Gene3D3.40.50.620. 1 hit.
InterProIPR001412. aa-tRNA-synth_I_CS.
IPR002305. aa-tRNA-synth_Ic.
IPR014729. Rossmann-like_a/b/a_fold.
IPR002306. Trp-tRNA-ligase.
[Graphical view]
PANTHERPTHR10055. PTHR10055. 1 hit.
PfamPF00579. tRNA-synt_1b. 1 hit.
[Graphical view]
PRINTSPR01039. TRNASYNTHTRP.
TIGRFAMsTIGR00233. trpS. 1 hit.
PROSITEPS00178. AA_TRNA_LIGASE_I. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB8FPL2_DESHD
AccessionPrimary (citable) accession number: B8FPL2
Entry history
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: May 14, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)