B8FPL2 (B8FPL2_DESHD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Tryptophanyl-tRNA synthetase EMBL ACL21444.1
EC=6.1.1.2 EMBL ACL21444.1

Gene names

Ordered Locus Names:

Dhaf_3426

Organism

Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) [Complete proteome] [HAMAP] EMBL ACL21444.1

Taxonomic identifier

272564 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Clostridiales › Peptococcaceae › Desulfitobacterium › Desulfitobacterium hafniense

Protein attributes

Sequence length	326 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-I aminoacyl-tRNA synthetase family. RuleBase RU003489

Ontologies

Keywords
Biological process	Protein biosynthesis RuleBase RU003489
Ligand	ATP-binding RuleBase RU003489 Nucleotide-binding
Molecular function	Aminoacyl-tRNA synthetase RuleBase RU003489 EMBL ACL21444.1 Ligase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	tryptophanyl-tRNA aminoacylation Inferred from electronic annotation. Source: InterPro
Cellular_component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW tryptophan-tRNA ligase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B8FPL2 [UniParc]. Last modified March 3, 2009. Version 1. Checksum: C6E1548EB762E03A	FASTA	326	36,800
	10 20 30 40 50 60 MKGRIFSGMR PTGSLHIGHL SVIQNWAALQ SEYQSYYGIV DQHALTTGYE DGLDFGVLIR 70 80 90 100 110 120 EIALDWLSVG IDPEQSAIFV QSHIKEHAEL HLLLSMITPL SWLERVPTYK DQMQQLGKEG 130 140 150 160 170 180 GKDISTYGFL GYPLLMAADI LVYKADTVPV GEDQIPHVEL CREIARRFNH LYGPVFPEPK 190 200 210 220 230 240 ALIGKVPLLP GVDGRKMSKS YNNTISLTAS TAEIKERVQQ MVTDPARLRK DDPGHPEVCI 250 260 270 280 290 300 VYKFHEVYTP EVAEVEENCR GGKIGCVACK RHLAENLDKL LSPFRERRAL WEEPGKVERV 310 320 LEQGAEQARQ VTQETMKEVR HVMGLR

References

[1]

"Complete sequence of Desulfitobacterium hafniense DCB-2." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Kuske C.R., Larimer F., Land M., Hauser L., Kyrpides N. , Ovchinnikova G., Madsen T., Christiansen N., Ahring B., Marsh T., Harzman C., Davis J.K., Kim S.-H., Tiedje J.M. Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DCB-2 / DSM 10664.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001336 Genomic DNA. Translation: ACL21444.1.
RefSeq	YP_002459880.1. NC_011830.1.
3D structure databases
ProteinModelPortal	B8FPL2.
SMR	B8FPL2. Positions 3-325.
ModBase	Search...
Protein-protein interaction databases
STRING	272564.Dhaf_3426.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACL21444; ACL21444; Dhaf_3426.
GeneID	7260444.
KEGG	dhd:Dhaf_3426.
PATRIC	21664825. VBIDesHaf15223_3571.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0180.
HOGENOM	HOG000059941.
KO	K01867.
OMA	AGIGCLE.
ProtClustDB	PRK00927.
Family and domain databases
Gene3D	3.40.50.620. 1 hit.
InterPro	IPR001412. aa-tRNA-synth_I_CS. IPR002305. aa-tRNA-synth_Ic. IPR014729. Rossmann-like_a/b/a_fold. IPR002306. Trp-tRNA-ligase. [Graphical view]
PANTHER	PTHR10055. PTHR10055. 1 hit.
Pfam	PF00579. tRNA-synt_1b. 1 hit. [Graphical view]
PRINTS	PR01039. TRNASYNTHTRP.
TIGRFAMs	TIGR00233. trpS. 1 hit.
PROSITE	PS00178. AA_TRNA_LIGASE_I. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B8FPL2_DESHD

Accession

Primary (citable) accession number: B8FPL2

Entry history

Integrated into UniProtKB/TrEMBL:	March 3, 2009
Last sequence update:	March 3, 2009
Last modified:	May 1, 2013
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)