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B8FFK3 (B8FFK3_DESAA) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Dalk_2570 EMBL ACL04263.1
OrganismDesulfatibacillum alkenivorans (strain AK-01) [Complete proteome] [HAMAP] EMBL ACL04263.1
Taxonomic identifier439235 [NCBI]
Taxonomic lineageBacteriaProteobacteriaDeltaproteobacteriaDesulfobacteralesDesulfobacteraceaeDesulfatibacillum

Protein attributes

Sequence length549 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Sequences

Sequence LengthMass (Da)Tools
B8FFK3 [UniParc].

Last modified March 3, 2009. Version 1.
Checksum: 510C1A3169E1F287

FASTA54961,050
        10         20         30         40         50         60 
MDRTSEAQRR ELVANRETLK RIFIMREDDS AKATLLKYME QIFFGLQDFL KDHVGITEER 

        70         80         90        100        110        120 
SLREMASRFQ NSLISEQPEK KLADVITELV EDIAPHAVNV ASPYFVGHMT SAMPFFMVHL 

       130        140        150        160        170        180 
AAFVAALNQN VVKLETSKIV SIVEKQLLAK IHRMIYQQDD AFYSRHIQSV DTSLGGFTED 

       190        200        210        220        230        240 
GTLANMTALW VARNSILNQA EGFAGVEQEG MFAAYQALGI ERMVVLVSQL GHYSLRKAAG 

       250        260        270        280        290        300 
LLGLGNKNVI GLPIDANNRV DVDALARAVK EISADPKTRI MAVVGIAGAT ETGSVDPLPR 

       310        320        330        340        350        360 
IAEICAEHNI HFHADAAWGG PTLFSEKYKH LLEGIDMADS VTIDGHKQFY MPMTCGMVYF 

       370        380        390        400        410        420 
KNPWAMDAIA YHSTYIARPG SVDLGIKSLA GSRASTSLIL DSALKVMGVK GYGILVEHGI 

       430        440        450        460        470        480 
GLARQFAKEI RARENFELVT PPELNILTYR YVPARLQERL QNAEPKEAVR INQCLNALNI 

       490        500        510        520        530        540 
VLQRDQREAG KSFVSRTTFR RPPEKGGDVV VLRTVLMNPM TRLRILKEIL DEQEQICQTK 


LGKAFGAIC 

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References

[1]"Complete sequence of Desulfatibacillum alkenivorans AK-01."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Wawrik B., Richardson P.
Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: AK-01 EMBL ACL04263.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001322 Genomic DNA. Translation: ACL04263.1.
RefSeqYP_002431731.1. NC_011768.1.

3D structure databases

ProteinModelPortalB8FFK3.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING439235.Dalk_2570.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACL04263; ACL04263; Dalk_2570.
GeneID7166503.
KEGGdal:Dalk_2570.
PATRIC21651794. VBIDesAlk8144_2751.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0076.
HOGENOMHOG000282553.
KOK01580.
OMAARYFRQP.
OrthoDBEOG6MSRZP.
ProtClustDBCLSK874231.

Enzyme and pathway databases

BioCycDALK439235:GHP2-2596-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB8FFK3_DESAA
AccessionPrimary (citable) accession number: B8FFK3
Entry history
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: November 13, 2013
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)