Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

B8FET7 (B8FET7_DESAA) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein attributes

Sequence length397 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325 HAMAP-Rule MF_00118

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325 HAMAP-Rule MF_00118

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding81 – 855GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding136 – 1394GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
B8FET7 [UniParc].

Last modified March 3, 2009. Version 1.
Checksum: 519FA43F1E443C54

FASTA39743,864
        10         20         30         40         50         60 
MAKAKYERTK PHVNVGTIGH IDHGKTTLTA AITKTLGQKG QANFIPFDQI DKAPEEKARG 

        70         80         90        100        110        120 
ITIATAHVEY ETDNRHYAHV DCPGHADYIK NMITGAAQMD GAILVVGADD GPMPQTREHI 

       130        140        150        160        170        180 
LLARQVGVPR IVVFLNKCDM VDDEELIELV ELELRELLDK YEFPGDDTPI IRGSALKALE 

       190        200        210        220        230        240 
ADSYEDDACK PIFELMDAID SFIPEPVRDT DKPFLMPIED VFSISGRGTV VTGRVERGII 

       250        260        270        280        290        300 
RVSEEVEIVG IRPTIKTVCT GVEMFRKILD EGQAGDNIGV LLRGTKREDV ERGQVVTHVG 

       310        320        330        340        350        360 
KIKPYTKFKA EVYVLSKEEG GRHTPFFTGY RPQFYFRTTD VTGVVTLPEG VEMVMPGDNV 

       370        380        390 
AVEAELITPI AMEKEVRFAI REGGRTVGAG VVSEIIE 

« Hide

References

« Hide 'large scale' references
[1]"Complete sequence of Desulfatibacillum alkenivorans AK-01."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Wawrik B., Richardson P.
Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: AK-01 EMBL ACL03614.1.
[2]"The genome sequence of Desulfatibacillum alkenivorans AK-01: a blueprint for anaerobic alkane oxidation."
Callaghan A.V., Morris B.E., Pereira I.A., McInerney M.J., Austin R.N., Groves J.T., Kukor J.J., Suflita J.M., Young L.Y., Zylstra G.J., Wawrik B.
Environ. Microbiol. 14:101-113(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: AK-01 EMBL ACL03614.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001322 Genomic DNA. Translation: ACL03614.1.
CP001322 Genomic DNA. Translation: ACL03625.1.
RefSeqYP_002431082.1. NC_011768.1.
YP_002431093.1. NC_011768.1.

3D structure databases

ProteinModelPortalB8FET7.
SMRB8FET7. Positions 2-396.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING439235.Dalk_1928.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACL03614; ACL03614; Dalk_1917.
ACL03625; ACL03625; Dalk_1928.
GeneID7165841.
7165853.
KEGGdal:Dalk_1917.
dal:Dalk_1928.
PATRIC21650358. VBIDesAlk8144_2042.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0050.
HOGENOMHOG000229290.
KOK02358.
OMADNIEMVG.
OrthoDBEOG6R5C6X.

Enzyme and pathway databases

BioCycDALK439235:GHP2-1934-MONOMER.
DALK439235:GHP2-1946-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB8FET7_DESAA
AccessionPrimary (citable) accession number: B8FET7
Entry history
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: June 11, 2014
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)