B8FDD3 (B8FDD3_DESAA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
O-antigen polymerase EMBL ACL06564.1

Gene names

Ordered Locus Names:

Dalk_4888

Organism

Desulfatibacillum alkenivorans (strain AK-01) [Complete proteome] [HAMAP]

Taxonomic identifier

439235 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Deltaproteobacteria › Desulfobacterales › Desulfobacteraceae › Desulfatibacillum

Protein attributes

Sequence length	762 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Domain	Repeat RuleBase RU003537 TPR repeat RuleBase RU003339
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B8FDD3 [UniParc]. Last modified March 3, 2009. Version 1. Checksum: 0EE940E8071224BA	FASTA	762	83,680
	10 20 30 40 50 60 MTLSNKQRKF IARNHGHMSV SKMASRLGAP VKEIEREIAA GAGEGAASPS ELARILDKAS 70 80 90 100 110 120 TMILFAIVAL TPFAVRPALY DQTNLPQTVF FIIGALLLSA VFCLKSYFSP KSAAPPTVFF 130 140 150 160 170 180 PLAALTLWGG LSIFWGTNAY EAVTIWLPWV ACLFFFSAAF NVPDSRERRL LLLKGLFLSG 190 200 210 220 230 240 TAVALLGILQ HLGGDVLQHM GGENWFGVKQ AEPPASTFTN RNMAVHFIVL TLPLGVGFFL 250 260 270 280 290 300 QEKRGWPAAA FLVCTTCMLN YLFYTSNRTG WLCLLLQIAV FAALLLVYKV KSGAIGMNRG 310 320 330 340 350 360 KMISLAVCLA LFLVLFNCGP KGFEWQFGKV FQRVSALSQS DLESPGTSPE TQAPADKKQD 370 380 390 400 410 420 SPAAPRKYDA SKRLRLDIWA NTLAMIKDHP LLGVGMGSHK VLYPIYSRRA KVEGAFSEES 430 440 450 460 470 480 QLSNVHNDYL QIAAELGLPG LIMVLWLGVS AFLILLRLFR KENGEEKFLV IAIAACLAGI 490 500 510 520 530 540 SLNAAASFPF QRMVPLLVVS LYLAMLARWD PKYEEKPPRI VAPPAPVWLI CGVAFTGLLI 550 560 570 580 590 600 AAGWAGSRAM KADEQYKWLD VGESAGNWNL VISKGNQVLA ADPYRVKVRS YLGRAYLEKQ 610 620 630 640 650 660 MPEKAAPELE KVIQAYPYHM NALLNLGVAY GTMGENEKAL EVYNKVLQIK PDYAKVHNNI 670 680 690 700 710 720 GNVQMNTGKI PEAVEAFTKA AELDGQNPQI WMNLGVAAFK ARDFEKAATA FEKCAVLAPG 730 740 750 760 WTRANRNAGH LLMQIGQKEK GLRYLQIADA LKKAEKQPKA TQ

References

[1]

"Complete sequence of Desulfatibacillum alkenivorans AK-01." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Wawrik B., Richardson P. Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: AK-01.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001322 Genomic DNA. Translation: ACL06564.1.
RefSeq	YP_002434032.1. NC_011768.1.
3D structure databases
ProteinModelPortal	B8FDD3.
ModBase	Search...
Protein-protein interaction databases
STRING	B8FDD3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7168859.
GenomeReviews	Gene locus Dalk_4888 in contig CP001322_GR.
KEGG	dal:Dalk_4888.
PATRIC	21656680. VBIDesAlk8144_5160.
Organism-specific databases
CMR	Search...
Phylogenomic databases
ProtClustDB	CLSK2411559.
Family and domain databases
InterPro	IPR007016. O-antigen_ligase-related. IPR001440. TPR-1. IPR013026. TPR-contain. IPR011990. TPR-like_helical. IPR013105. TPR_2. IPR019734. TPR_repeat. [Graphical view]
Gene3D	G3DSA:1.25.40.10. TPR-like_helical. 2 hits.
Pfam	PF00515. TPR_1. 2 hits. PF07719. TPR_2. 1 hit. PF04932. Wzy_C. 1 hit. [Graphical view]
SMART	SM00028. TPR. 4 hits. [Graphical view]
PROSITE	PS50005. TPR. 5 hits. PS50293. TPR_REGION. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B8FDD3_DESAA

Accession

Primary (citable) accession number: B8FDD3

Entry history

Integrated into UniProtKB/TrEMBL:	March 3, 2009
Last sequence update:	March 3, 2009
Last modified:	December 14, 2011
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)