B8FBD5 (B8FBD5_DESAA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Histone family protein DNA-binding protein EMBL ACL04579.1

Gene names

Ordered Locus Names:

Dalk_2889

Organism

Desulfatibacillum alkenivorans (strain AK-01) [Complete proteome] [HAMAP]

Taxonomic identifier

439235 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Deltaproteobacteria › Desulfobacterales › Desulfobacteraceae › Desulfatibacillum

Protein attributes

Sequence length	89 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the bacterial histone-like protein family. RuleBase RU003939

Ontologies

Keywords
Ligand	DNA-binding EMBL ACL04579.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B8FBD5 [UniParc]. Last modified March 3, 2009. Version 1. Checksum: 61CAC422F93F12FD	FASTA	89	9,582
	10 20 30 40 50 60 MNKADLIEEV AKVLGTKKDA QAAVDCVFAT ISEALKKDDA VTLVGFGTFK VDKRQARKGR 70 80 NPRTGEALDI PARNVPKFNP GKALKDAVN

References

[1]

"Complete sequence of Desulfatibacillum alkenivorans AK-01." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Wawrik B., Richardson P. Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: AK-01.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001322 Genomic DNA. Translation: ACL04579.1.
RefSeq	YP_002432047.1. NC_011768.1.
3D structure databases
ProteinModelPortal	B8FBD5.
SMR	B8FBD5. Positions 1-88.
ModBase	Search...
Protein-protein interaction databases
STRING	B8FBD5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7166826.
GenomeReviews	Gene locus Dalk_2889 in contig CP001322_GR.
KEGG	dal:Dalk_2889.
PATRIC	21652474. VBIDesAlk8144_3087.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG705085.
OMA	MNSITYE.
ProtClustDB	CLSK2397573.
Family and domain databases
InterPro	IPR023630. DNA-bd_HU/IHF. IPR000119. Hist_DNA-bd_bac. IPR020816. Histone-like_DNA-bd_CS. IPR010992. IHF-like_DNA-bd. [Graphical view]
Gene3D	G3DSA:4.10.520.10. Hist_DNA_bd_bac. 1 hit.
KO	K03530.
Pfam	PF00216. Bac_DNA_binding. 1 hit. [Graphical view]
PRINTS	PR01727. DNABINDINGHU.
SMART	SM00411. BHL. 1 hit. [Graphical view]
SUPFAM	SSF47729. IHF_like_DNA_bnd. 1 hit.
PROSITE	PS00045. HISTONE_LIKE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B8FBD5_DESAA

Accession

Primary (citable) accession number: B8FBD5

Entry history

Integrated into UniProtKB/TrEMBL:	March 3, 2009
Last sequence update:	March 3, 2009
Last modified:	December 14, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)