B8F9C5 (B8F9C5_DESAA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Radical SAM domain protein EMBL ACL02871.1

Gene names

Ordered Locus Names:

Dalk_1168

Organism

Desulfatibacillum alkenivorans (strain AK-01) [Complete proteome] [HAMAP]

Taxonomic identifier

439235 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Deltaproteobacteria › Desulfobacterales › Desulfobacteraceae › Desulfatibacillum

Protein attributes

Sequence length	471 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	catalytic activity Inferred from electronic annotation. Source: InterPro cobalamin binding Inferred from electronic annotation. Source: InterPro iron-sulfur cluster binding Inferred from electronic annotation. Source: InterPro metal ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B8F9C5 [UniParc]. Last modified March 3, 2009. Version 1. Checksum: 21EB4608B02CD240	FASTA	471	51,318
	10 20 30 40 50 60 MNMSQKPHLL LVKVPSYSDV IAPPLGLGYL AAAVRDSARV SLLDGVRLGL TPKKLYSTAK 70 80 90 100 110 120 SLNPDMVGFS VVSAAKSPAV QCIGAVRKAL PKAVILAGGP HPTAMPMEFL EETAPHLDFV 130 140 150 160 170 180 LRGEAEEGLR ILCREFPAQG VQDISPDDLN KIPGMAAIGK DTPICRPPAV REDINDPAMP 190 200 210 220 230 240 AWDLMPPGQY PKAPHGAFFR RFPVAPALTS RGCSYGCGFC SVPALTGGKI RFRAPQLVAE 250 260 270 280 290 300 ELMALKTRFG VQEAQIIDDN FTANKAHALN TCRALINSGV NLPWTCPNGV RMENLDKELI 310 320 330 340 350 360 QAMKGAGCYS VSLGLESGSA KVLNRMKKGL SLDHVGERVE LLAKAGLEVN GFFILGYPEE 370 380 390 400 410 420 TRQDMKATLD FAKSLPLTRA NFSLFTPLPG CPEWERLSAD PAAMEGLTTT FSQVGYVPQG 430 440 450 460 470 FSRSSLKRQQ RKAFLGFYLQ RRNAERLLAS LRSREAVYYF ARRAWHWMGA S

References

[1]

"Complete sequence of Desulfatibacillum alkenivorans AK-01." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Wawrik B., Richardson P. Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: AK-01.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001322 Genomic DNA. Translation: ACL02871.1.
RefSeq	YP_002430339.1. NC_011768.1.
3D structure databases
ProteinModelPortal	B8F9C5.
ModBase	Search...
Protein-protein interaction databases
STRING	B8F9C5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7165082.
GenomeReviews	Gene locus Dalk_1168 in contig CP001322_GR.
KEGG	dal:Dalk_1168.
PATRIC	21648730. VBIDesAlk8144_1238.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	WLTTENW.
Family and domain databases
InterPro	IPR006158. Cobalamin-bd. IPR006638. Elp3/MiaB/NifB. IPR023970. MeThioTfrase/B12-bd/rSAM. IPR007197. rSAM. IPR023404. rSAM_horseshoe. [Graphical view]
Gene3D	G3DSA:3.80.30.20. G3DSA:3.80.30.20. 1 hit.
PANTHER	PTHR11918. UPF0004. 1 hit.
Pfam	PF02310. B12-binding. 1 hit. PF04055. Radical_SAM. 1 hit. [Graphical view]
SMART	SM00729. Elp3. 1 hit. [Graphical view]
PROSITE	PS51332. B12_BINDING. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B8F9C5_DESAA

Accession

Primary (citable) accession number: B8F9C5

Entry history

Integrated into UniProtKB/TrEMBL:	March 3, 2009
Last sequence update:	March 3, 2009
Last modified:	December 14, 2011
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)