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B8F711

- SYGB_HAEPS

UniProt

B8F711 - SYGB_HAEPS

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Protein
Glycine--tRNA ligase beta subunit
Gene
glyS, HAPS_1559
Organism
Haemophilus parasuis serovar 5 (strain SH0165)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly).UniRule annotation

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. arginine-tRNA ligase activity Source: InterPro
  3. glycine-tRNA ligase activity Source: UniProtKB-EC

GO - Biological processi

  1. arginyl-tRNA aminoacylation Source: InterPro
  2. glycyl-tRNA aminoacylation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Aminoacyl-tRNA synthetase, Ligase

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciHPAR557723:GH24-1559-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycine--tRNA ligase beta subunit (EC:6.1.1.14)
Alternative name(s):
Glycyl-tRNA synthetase beta subunit
Short name:
GlyRS
Gene namesi
Name:glyS
Ordered Locus Names:HAPS_1559
OrganismiHaemophilus parasuis serovar 5 (strain SH0165)
Taxonomic identifieri557723 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeHaemophilus
ProteomesiUP000006743: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 689689Glycine--tRNA ligase beta subunitUniRule annotation
PRO_1000197202Add
BLAST

Proteomic databases

PRIDEiB8F711.

Interactioni

Subunit structurei

Tetramer of two alpha and two beta subunits By similarity.

Protein-protein interaction databases

STRINGi557723.HAPS_1559.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0751.
HOGENOMiHOG000264303.
KOiK01879.
OMAiLPIPKRM.
OrthoDBiEOG661H9S.

Family and domain databases

HAMAPiMF_00255. Gly_tRNA_synth_beta.
InterProiIPR008909. DALR_anticod-bd.
IPR015944. Gly-tRNA-synth_bsu.
IPR006194. Gly-tRNA-synth_heterodimer.
[Graphical view]
PfamiPF05746. DALR_1. 1 hit.
PF02092. tRNA_synt_2f. 1 hit.
[Graphical view]
PRINTSiPR01045. TRNASYNTHGB.
SMARTiSM00836. DALR_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00211. glyS. 1 hit.
PROSITEiPS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B8F711-1 [UniParc]FASTAAdd to Basket

« Hide

MTTQNFLAEI GTEELPPKAL KKLATAFAEN VEAELNQAGL SFDKVEWFAA    50
PRRLAVKVLG LATAQPSKEV EKRGPAVSAA FDAEGKPTKA AEGWAKGCGI 100
TVEQAERIAT DKGEWLVHRA VIEGQPTKNL LVGIISQALA KLPIPKTMRW 150
GDKTEQFVRP VHTVTLLLGD ELIEGEILGV ASGTTVRGHR FLGEREFQIS 200
HADQYPALLK EKGSVVADFN ERKALILAKA QEKATALGGV ADIEEDLLDE 250
VTSLVEYPNV LAAKFEERFL AVPAEALVYT MKGDQKYFPI YDKDGKLLPH 300
FIFVSNINPE DPSKIIEGNE KVVRPRLTDA EFFFKTDLKQ RLEDQLPRLE 350
TVLFQQQLGT LRDKTARIEQ LAGEIAKQIG ADETKAKRAG LLSKCDLMTN 400
MVFEFTDTQG VMGMHYARHD GEDEEVAVAL NEQYMPRFAG DELPKSLVAS 450
SVALADKFDT LTGIFGIGQA PKGSADPFAL RRAALGALRI IVEKNLPLDL 500
SDLVATSAKL FGDKLTNSNV VEEVVDFMLG RFRAWYQDEG IAVDVIQAVL 550
ARRPTRPADF DARVRAVSHF RTLDSAEALA AANKRVSNIL AKVEGKISSE 600
IDRTLLVEAE EKALAEQVIT LQAELVPLFE KGEYQTALDR LAGLREVVDN 650
FFDKVMVNAE DPKLRQNRQA ILNNLRNLFL QVADISLLQ 689
Length:689
Mass (Da):76,027
Last modified:March 3, 2009 - v1
Checksum:i8ABB781988A62A17
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001321 Genomic DNA. Translation: ACL33113.1.
RefSeqiYP_002476061.1. NC_011852.1.

Genome annotation databases

EnsemblBacteriaiACL33113; ACL33113; HAPS_1559.
GeneIDi7277007.
KEGGihap:HAPS_1559.
PATRICi20195415. VBIHaePar127548_1531.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001321 Genomic DNA. Translation: ACL33113.1 .
RefSeqi YP_002476061.1. NC_011852.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 557723.HAPS_1559.

Proteomic databases

PRIDEi B8F711.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACL33113 ; ACL33113 ; HAPS_1559 .
GeneIDi 7277007.
KEGGi hap:HAPS_1559.
PATRICi 20195415. VBIHaePar127548_1531.

Phylogenomic databases

eggNOGi COG0751.
HOGENOMi HOG000264303.
KOi K01879.
OMAi LPIPKRM.
OrthoDBi EOG661H9S.

Enzyme and pathway databases

BioCyci HPAR557723:GH24-1559-MONOMER.

Family and domain databases

HAMAPi MF_00255. Gly_tRNA_synth_beta.
InterProi IPR008909. DALR_anticod-bd.
IPR015944. Gly-tRNA-synth_bsu.
IPR006194. Gly-tRNA-synth_heterodimer.
[Graphical view ]
Pfami PF05746. DALR_1. 1 hit.
PF02092. tRNA_synt_2f. 1 hit.
[Graphical view ]
PRINTSi PR01045. TRNASYNTHGB.
SMARTi SM00836. DALR_1. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR00211. glyS. 1 hit.
PROSITEi PS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of Haemophilus parasuis SH0165."
    Yue M., Yang F., Yang J., Bei W., Cai X., Chen L., Dong J., Zhou R., Jin M., Jin Q., Chen H.
    J. Bacteriol. 191:1359-1360(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SH0165.

Entry informationi

Entry nameiSYGB_HAEPS
AccessioniPrimary (citable) accession number: B8F711
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 28, 2009
Last sequence update: March 3, 2009
Last modified: May 14, 2014
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Aminoacyl-tRNA synthetases
    List of aminoacyl-tRNA synthetase entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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