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Protein

Glycine--tRNA ligase beta subunit

Gene

glyS

Organism
Haemophilus parasuis serovar 5 (strain SH0165) (Glaesserella parasuis)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly).UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionAminoacyl-tRNA synthetase, Ligase
Biological processProtein biosynthesis
LigandATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciHPAR557723:G1GUF-1543-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Glycine--tRNA ligase beta subunitUniRule annotation (EC:6.1.1.14UniRule annotation)
Alternative name(s):
Glycyl-tRNA synthetase beta subunitUniRule annotation
Short name:
GlyRSUniRule annotation
Gene namesi
Name:glySUniRule annotation
Ordered Locus Names:HAPS_1559
OrganismiHaemophilus parasuis serovar 5 (strain SH0165) (Glaesserella parasuis)
Taxonomic identifieri557723 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeGlaesserella
Proteomesi
  • UP000006743 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10001972021 – 689Glycine--tRNA ligase beta subunitAdd BLAST689

Proteomic databases

PRIDEiB8F711

Interactioni

Subunit structurei

Tetramer of two alpha and two beta subunits.UniRule annotation

Protein-protein interaction databases

STRINGi557723.HAPS_1559

Structurei

3D structure databases

SMRiB8F711
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-II aminoacyl-tRNA synthetase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105C38 Bacteria
COG0751 LUCA
HOGENOMiHOG000264303
KOiK01879
OMAiKENQRYF

Family and domain databases

HAMAPiMF_00255 Gly_tRNA_synth_beta, 1 hit
InterProiView protein in InterPro
IPR008909 DALR_anticod-bd
IPR015944 Gly-tRNA-synth_bsu
IPR006194 Gly-tRNA-synth_heterodimer
PANTHERiPTHR30075 PTHR30075, 1 hit
PfamiView protein in Pfam
PF05746 DALR_1, 1 hit
PF02092 tRNA_synt_2f, 1 hit
PRINTSiPR01045 TRNASYNTHGB
TIGRFAMsiTIGR00211 glyS, 1 hit
PROSITEiView protein in PROSITE
PS50861 AA_TRNA_LIGASE_II_GLYAB, 1 hit

Sequencei

Sequence statusi: Complete.

B8F711-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTTQNFLAEI GTEELPPKAL KKLATAFAEN VEAELNQAGL SFDKVEWFAA
60 70 80 90 100
PRRLAVKVLG LATAQPSKEV EKRGPAVSAA FDAEGKPTKA AEGWAKGCGI
110 120 130 140 150
TVEQAERIAT DKGEWLVHRA VIEGQPTKNL LVGIISQALA KLPIPKTMRW
160 170 180 190 200
GDKTEQFVRP VHTVTLLLGD ELIEGEILGV ASGTTVRGHR FLGEREFQIS
210 220 230 240 250
HADQYPALLK EKGSVVADFN ERKALILAKA QEKATALGGV ADIEEDLLDE
260 270 280 290 300
VTSLVEYPNV LAAKFEERFL AVPAEALVYT MKGDQKYFPI YDKDGKLLPH
310 320 330 340 350
FIFVSNINPE DPSKIIEGNE KVVRPRLTDA EFFFKTDLKQ RLEDQLPRLE
360 370 380 390 400
TVLFQQQLGT LRDKTARIEQ LAGEIAKQIG ADETKAKRAG LLSKCDLMTN
410 420 430 440 450
MVFEFTDTQG VMGMHYARHD GEDEEVAVAL NEQYMPRFAG DELPKSLVAS
460 470 480 490 500
SVALADKFDT LTGIFGIGQA PKGSADPFAL RRAALGALRI IVEKNLPLDL
510 520 530 540 550
SDLVATSAKL FGDKLTNSNV VEEVVDFMLG RFRAWYQDEG IAVDVIQAVL
560 570 580 590 600
ARRPTRPADF DARVRAVSHF RTLDSAEALA AANKRVSNIL AKVEGKISSE
610 620 630 640 650
IDRTLLVEAE EKALAEQVIT LQAELVPLFE KGEYQTALDR LAGLREVVDN
660 670 680
FFDKVMVNAE DPKLRQNRQA ILNNLRNLFL QVADISLLQ
Length:689
Mass (Da):76,027
Last modified:March 3, 2009 - v1
Checksum:i8ABB781988A62A17
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001321 Genomic DNA Translation: ACL33113.1
RefSeqiWP_015939829.1, NC_011852.1

Genome annotation databases

EnsemblBacteriaiACL33113; ACL33113; HAPS_1559
GeneIDi7277007
KEGGihap:HAPS_1559
PATRICifig|557723.8.peg.1531

Similar proteinsi

Entry informationi

Entry nameiSYGB_HAEPS
AccessioniPrimary (citable) accession number: B8F711
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 28, 2009
Last sequence update: March 3, 2009
Last modified: April 25, 2018
This is version 57 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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