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B8F711

- SYGB_HAEPS

UniProt

B8F711 - SYGB_HAEPS

Protein

Glycine--tRNA ligase beta subunit

Gene

glyS

Organism
Haemophilus parasuis serovar 5 (strain SH0165)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 37 (01 Oct 2014)
      Sequence version 1 (03 Mar 2009)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly).UniRule annotation

    GO - Molecular functioni

    1. arginine-tRNA ligase activity Source: InterPro
    2. ATP binding Source: UniProtKB-KW
    3. glycine-tRNA ligase activity Source: UniProtKB-EC

    GO - Biological processi

    1. arginyl-tRNA aminoacylation Source: InterPro
    2. glycyl-tRNA aminoacylation Source: InterPro

    Keywords - Molecular functioni

    Aminoacyl-tRNA synthetase, Ligase

    Keywords - Biological processi

    Protein biosynthesis

    Keywords - Ligandi

    ATP-binding, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciHPAR557723:GH24-1559-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glycine--tRNA ligase beta subunitUniRule annotation (EC:6.1.1.14UniRule annotation)
    Alternative name(s):
    Glycyl-tRNA synthetase beta subunitUniRule annotation
    Short name:
    GlyRSUniRule annotation
    Gene namesi
    Name:glySUniRule annotation
    Ordered Locus Names:HAPS_1559
    OrganismiHaemophilus parasuis serovar 5 (strain SH0165)
    Taxonomic identifieri557723 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeHaemophilus
    ProteomesiUP000006743: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 689689Glycine--tRNA ligase beta subunitPRO_1000197202Add
    BLAST

    Proteomic databases

    PRIDEiB8F711.

    Interactioni

    Subunit structurei

    Tetramer of two alpha and two beta subunits.UniRule annotation

    Protein-protein interaction databases

    STRINGi557723.HAPS_1559.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the class-II aminoacyl-tRNA synthetase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0751.
    HOGENOMiHOG000264303.
    KOiK01879.
    OMAiLPIPKRM.
    OrthoDBiEOG661H9S.

    Family and domain databases

    HAMAPiMF_00255. Gly_tRNA_synth_beta.
    InterProiIPR008909. DALR_anticod-bd.
    IPR015944. Gly-tRNA-synth_bsu.
    IPR006194. Gly-tRNA-synth_heterodimer.
    [Graphical view]
    PfamiPF05746. DALR_1. 1 hit.
    PF02092. tRNA_synt_2f. 1 hit.
    [Graphical view]
    PRINTSiPR01045. TRNASYNTHGB.
    SMARTiSM00836. DALR_1. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR00211. glyS. 1 hit.
    PROSITEiPS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B8F711-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTTQNFLAEI GTEELPPKAL KKLATAFAEN VEAELNQAGL SFDKVEWFAA    50
    PRRLAVKVLG LATAQPSKEV EKRGPAVSAA FDAEGKPTKA AEGWAKGCGI 100
    TVEQAERIAT DKGEWLVHRA VIEGQPTKNL LVGIISQALA KLPIPKTMRW 150
    GDKTEQFVRP VHTVTLLLGD ELIEGEILGV ASGTTVRGHR FLGEREFQIS 200
    HADQYPALLK EKGSVVADFN ERKALILAKA QEKATALGGV ADIEEDLLDE 250
    VTSLVEYPNV LAAKFEERFL AVPAEALVYT MKGDQKYFPI YDKDGKLLPH 300
    FIFVSNINPE DPSKIIEGNE KVVRPRLTDA EFFFKTDLKQ RLEDQLPRLE 350
    TVLFQQQLGT LRDKTARIEQ LAGEIAKQIG ADETKAKRAG LLSKCDLMTN 400
    MVFEFTDTQG VMGMHYARHD GEDEEVAVAL NEQYMPRFAG DELPKSLVAS 450
    SVALADKFDT LTGIFGIGQA PKGSADPFAL RRAALGALRI IVEKNLPLDL 500
    SDLVATSAKL FGDKLTNSNV VEEVVDFMLG RFRAWYQDEG IAVDVIQAVL 550
    ARRPTRPADF DARVRAVSHF RTLDSAEALA AANKRVSNIL AKVEGKISSE 600
    IDRTLLVEAE EKALAEQVIT LQAELVPLFE KGEYQTALDR LAGLREVVDN 650
    FFDKVMVNAE DPKLRQNRQA ILNNLRNLFL QVADISLLQ 689
    Length:689
    Mass (Da):76,027
    Last modified:March 3, 2009 - v1
    Checksum:i8ABB781988A62A17
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001321 Genomic DNA. Translation: ACL33113.1.
    RefSeqiYP_002476061.1. NC_011852.1.

    Genome annotation databases

    EnsemblBacteriaiACL33113; ACL33113; HAPS_1559.
    GeneIDi7277007.
    KEGGihap:HAPS_1559.
    PATRICi20195415. VBIHaePar127548_1531.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001321 Genomic DNA. Translation: ACL33113.1 .
    RefSeqi YP_002476061.1. NC_011852.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 557723.HAPS_1559.

    Proteomic databases

    PRIDEi B8F711.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACL33113 ; ACL33113 ; HAPS_1559 .
    GeneIDi 7277007.
    KEGGi hap:HAPS_1559.
    PATRICi 20195415. VBIHaePar127548_1531.

    Phylogenomic databases

    eggNOGi COG0751.
    HOGENOMi HOG000264303.
    KOi K01879.
    OMAi LPIPKRM.
    OrthoDBi EOG661H9S.

    Enzyme and pathway databases

    BioCyci HPAR557723:GH24-1559-MONOMER.

    Family and domain databases

    HAMAPi MF_00255. Gly_tRNA_synth_beta.
    InterProi IPR008909. DALR_anticod-bd.
    IPR015944. Gly-tRNA-synth_bsu.
    IPR006194. Gly-tRNA-synth_heterodimer.
    [Graphical view ]
    Pfami PF05746. DALR_1. 1 hit.
    PF02092. tRNA_synt_2f. 1 hit.
    [Graphical view ]
    PRINTSi PR01045. TRNASYNTHGB.
    SMARTi SM00836. DALR_1. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR00211. glyS. 1 hit.
    PROSITEi PS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of Haemophilus parasuis SH0165."
      Yue M., Yang F., Yang J., Bei W., Cai X., Chen L., Dong J., Zhou R., Jin M., Jin Q., Chen H.
      J. Bacteriol. 191:1359-1360(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: SH0165.

    Entry informationi

    Entry nameiSYGB_HAEPS
    AccessioniPrimary (citable) accession number: B8F711
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 28, 2009
    Last sequence update: March 3, 2009
    Last modified: October 1, 2014
    This is version 37 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Aminoacyl-tRNA synthetases
      List of aminoacyl-tRNA synthetase entries
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3