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B8F3S8 (GLGA_HAEPS) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:HAPS_0293
OrganismHaemophilus parasuis serovar 5 (strain SH0165) [Complete proteome] [HAMAP]
Taxonomic identifier557723 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeHaemophilus

Protein attributes

Sequence length477 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 477477Glycogen synthase HAMAP-Rule MF_00484
PRO_1000135652

Sites

Binding site151ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
B8F3S8 [UniParc].

Last modified March 3, 2009. Version 1.
Checksum: 4EECA37B736F89B4

FASTA47753,478
        10         20         30         40         50         60 
MKILHICSEM YPLIKTGGLA DVMGALPYAQ QSAGNDVRVL IPYYPQVASK LGETVEVATV 

        70         80         90        100        110        120 
GTFAGVVTVR FAYLNGLGVY VIDAPHLFDR RLPYYDDNYQ DYTDNYKRFA LLGYLGAQLA 

       130        140        150        160        170        180 
SGLDHWWGRS DVLHAHDWQA GLACAYLKSW NSPVKSVFTI HNIAYPGRFQ AYHLAELALP 

       190        200        210        220        230        240 
WEFFHVNGLE FYGEISYLKA GLFYADRVTA VSPTYAREIT EQIAGAGMHG LLQQRLAEGA 

       250        260        270        280        290        300 
LRGILNGVDD TVWNPETDTN IVANYRPNYM QGKGKNKSEL QRYFGLPEDK DALLFVMVTR 

       310        320        330        340        350        360 
LTEQKGADFL LARIDQIMQH NVQLVVLGSG SPDLEWALRD AQSRYPHKIG LKIGYDEALS 

       370        380        390        400        410        420 
HQIIAGGDVI LVPSRFEPCG LTQLYGLKYG TLPLVRRTGG LADTVNDAHK ESIENRTATG 

       430        440        450        460        470 
FVFSYPDADN FYDAVLRAIN LWGKNKLWSS VRQNALAQDF GWAKVAQQYQ ELYYEIV 

« Hide

References

[1]"Complete genome sequence of Haemophilus parasuis SH0165."
Yue M., Yang F., Yang J., Bei W., Cai X., Chen L., Dong J., Zhou R., Jin M., Jin Q., Chen H.
J. Bacteriol. 191:1359-1360(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: SH0165.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001321 Genomic DNA. Translation: ACL31980.1.
RefSeqYP_002474928.1. NC_011852.1.

3D structure databases

ProteinModelPortalB8F3S8.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING557723.HAPS_0293.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACL31980; ACL31980; HAPS_0293.
GeneID7277275.
KEGGhap:HAPS_0293.
PATRIC20192861. VBIHaePar127548_0300.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294941.
KOK00703.
OMAVHCNDWQ.
OrthoDBEOG6JTC6Z.
ProtClustDBPRK00654.

Enzyme and pathway databases

BioCycHPAR557723:GH24-293-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_HAEPS
AccessionPrimary (citable) accession number: B8F3S8
Entry history
Integrated into UniProtKB/Swiss-Prot: July 28, 2009
Last sequence update: March 3, 2009
Last modified: February 19, 2014
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways