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B8F3I4 (B8F3I4_HAEPS) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:bgaC EMBL ACL31886.1
Ordered Locus Names:HAPS_0190
OrganismHaemophilus parasuis serovar 5 (strain SH0165) [Complete proteome] [HAMAP]
Taxonomic identifier557723 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeHaemophilus

Protein attributes

Sequence length596 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
B8F3I4 [UniParc].

Last modified March 3, 2009. Version 1.
Checksum: 8D077FFB134C9CF9

FASTA59668,640
        10         20         30         40         50         60 
MPFQIGEKDF LLNGKPFKIL SGAVHYFRIV PEYWYKTLYN LKAMGCNTVE TYVPWNLHQP 

        70         80         90        100        110        120 
QPDQFNFSKR ADLVKFLQTA KDLGLYVILR PTPYICAEWE FGGLPAWLLN IPNIRLRQND 

       130        140        150        160        170        180 
PLFIAEIDRY FQELLPRIAP YQITQGGNIL MMQIENEYGS FGNDKNYLRA IRALMLIHGV 

       190        200        210        220        230        240 
NVPLFTSDGA WQNALEAGAL IEDDILPTGN FGSRSNENLD ELQRYIDKHG KSYPLMCMEF 

       250        260        270        280        290        300 
WDGWFNRWKE PVIRRDAQDL ANCTKELLER ASINFYMFQG GTNFGFWNGC SARLDTDLPQ 

       310        320        330        340        350        360 
VTSYDYDAPV HEWGEPSEKF YLLQKVLGQY PDASPIVDPI LPNITAYPPL AVQNEVSLFG 

       370        380        390        400        410        420 
TLDTISECYE SPFTQTMEQL GHYYGYLLYR AKPMAYSGEI KLRIYQGRDR IQIFNDKQKV 

       430        440        450        460        470        480 
ATQYQHEIGN EVMLQTPNGE FQLDLLVENM GRVNYGGKLL APTQHKGIGA GAVLDLHFHT 

       490        500        510        520        530        540 
GWQQYAIDFD RLEEIDFDGE KDSQTPSFYQ FKLHLDQEPQ DTFIDTRAFG KGVIVVNGEN 

       550        560        570        580        590 
LGRYWNEGPT CYLYLPAPLL HKGENEIIVF ETEGVKIDSL TFSDKPIYKE LNTKNL 

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References

[1]"Complete genome sequence of Haemophilus parasuis SH0165."
Yue M., Yang F., Yang J., Bei W., Cai X., Chen L., Dong J., Zhou R., Jin M., Jin Q., Chen H.
J. Bacteriol. 191:1359-1360(2009) [PubMed: 19074396] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: SH0165 EMBL ACL31886.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001321 Genomic DNA. Translation: ACL31886.1.
RefSeqYP_002474834.1. NC_011852.1.

3D structure databases

ProteinModelPortalB8F3I4.
ModBaseSearch...

Protein-protein interaction databases

STRINGB8F3I4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7278032.
GenomeReviewsGene locus HAPS_0190 in contig CP001321_GR.
KEGGhap:HAPS_0190.
PATRIC20192654. VBIHaePar127548_0198.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG292753.
OMAENMGRVS.
ProtClustDBCLSK881272.

Family and domain databases

InterProIPR008979. Galactose-bd-like.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR001944. Glycoside_Hdrlase_35.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KOK12308.
PANTHERPTHR23421. Glyco_hydro_35. 1 hit.
PfamPF01301. Glyco_hydro_35. 1 hit.
[Graphical view]
PRINTSPR00742. GLHYDRLASE35.
SUPFAMSSF49785. Gal_bind_like. 1 hit.
SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB8F3I4_HAEPS
AccessionPrimary (citable) accession number: B8F3I4
Entry history
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: December 14, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)