Skip Header

Contribute Send feedback
Read comments (?) or add your own

B8ERA6 (B8ERA6_METSB) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Malate synthase G HAMAP MF_00641
EC=2.3.3.9 HAMAP MF_00641
Gene names
Name:glcB HAMAP MF_00641
Ordered Locus Names:Msil_1325
OrganismMethylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) [Complete proteome] [HAMAP] EMBL ACK50290.1
Taxonomic identifier395965 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Beijerinckiaceae › Methylocella

Protein attributes

Sequence length721 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Acetyl-CoA + H2O + glyoxylate = (S)-malate + CoA. HAMAP MF_00641 SAAS SAAS006253

Pathway

Carbohydrate metabolism; glyoxylate cycle; (S)-malate from isocitrate: step 2/2. HAMAP MF_00641 SAAS SAAS006253

Subunit structure

Monomer By similarity. HAMAP MF_00641 SAAS SAAS006253

Subcellular location

Cytoplasm By similarity HAMAP MF_00641.

Sequence similarities

Belongs to the malate synthase family. GlcB subfamily. HAMAP MF_00641

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site3381Proton acceptor By similarity HAMAP MF_00641
Active site6281Proton donor By similarity HAMAP MF_00641

Sequences

Sequence LengthMass (Da)Tools
B8ERA6 [UniParc].

Last modified March 3, 2009. Version 1.
Checksum: 5E1CC2CFF57DD11E

FASTA72179,102
        10         20         30         40         50         60 
MAYAQIGPIS VDTALRDFVE TDVLPGTGVK ADQFWTGLAG LIEDFAPRIR AQLRFRDELQ 

        70         80         90        100        110        120 
SKIDAYHKIY AARSFDMAGY EAFLREIGYI VPEPPDFAIR TENTREVARV SGPQLVVPAS 

       130        140        150        160        170        180 
NARFVLNAAN ARWGSLFDAL YGSDVIPETP GAERGKGYNK ARGARVIEYA RNLLDELVPL 

       190        200        210        220        230        240 
SKGSHKDVIS YKVANGELVA ELDNGLETRL KHPGRFAGWR RTGPGSFVVL LRQHGLHIEL 

       250        260        270        280        290        300 
DIDPVSLVGS ESKSGLADVI LEAALSAIVD LEDSVAAVDA QDKVDVYRNW LGLMKGELSA 

       310        320        330        340        350        360 
TLEKKGLLIE RRLNPDRVYT DRDGAPMALH GRSLLLVRNV GHHVRTDAVL DADGHEVPET 

       370        380        390        400        410        420 
IVDAAVTALI GMHDVKGAGP IHNSRSGSIY IVKPKMHGPD EVALANDLFG RVEDMLGLDR 

       430        440        450        460        470        480 
FTLKMGIMDE ERRTTVNLKA CIFAAADRVF FINTGFLDRT GDEIHTSMEA GPMIRKDEIK 

       490        500        510        520        530        540 
GTPWIAAYEN NNVDIGLACG LPGRAQIGKG MWAAPDNMAE MVAKKIAHPL SGANTAWVPS 

       550        560        570        580        590        600 
PTAATLHALH YHRVDVAMRQ AELRKRPRAK LTDILTIPLA KTNWAPDDIK QEIENNCQGI 

       610        620        630        640        650        660 
LGYVVRWVDQ GIGCSKVPDV HDVALMEDRA TLRISSQHIA NWLRHDIVTK EQVLAALKTM 

       670        680        690        700        710        720 
AVVVDRQNAG DPLYGPMAPN FDGPAFKAAL DLIFKGREEP NGYTEGLLAS WRREAKAMQA 


S

« Hide

References

[1]"Complete sequence of Methylocella silvestris BL2."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Forester B., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Dunfield P.F., Dedysh S.N., Liesack W. expand/collapse author list , Stott M.B., Smirnova A.V., Alam M., Chen Y., Murrell J.C., Richardson P.
Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BL2 / DSM 15510 / NCIMB 13906.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001280 Genomic DNA. Translation: ACK50290.1.
RefSeqYP_002361652.1. NC_011666.1.

3D structure databases

ProteinModelPortalB8ERA6.
SMRB8ERA6. Positions 6-720.
ModBaseSearch...

Protein-protein interaction databases

STRINGB8ERA6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7091335.
GenomeReviewsGene locus Msil_1325 in contig CP001280_GR.
KEGGmsl:Msil_1325.
PATRIC22598137. VBIMetSil55537_1446.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG350005.
OMAPKMHGPD.
ProtClustDBPRK02999.

Family and domain databases

HAMAPMF_00641. Malate_synth_G.
[Tree]
InterProIPR011076. Malate_synth-like.
IPR023310. Malate_synth_G_beta_sub_dom.
IPR001465. Malate_synthase.
IPR006253. Malate_synthG.
[Graphical view]
Gene3DG3DSA:2.170.170.11. Malate_synth_G_beta_sub_dom. 2 hits.
KOK01638.
PANTHERPTHR21631:SF1. Malate_synthase. 1 hit.
PfamPF01274. Malate_synthase. 1 hit.
[Graphical view]
SUPFAMSSF51645. Malat_synth_like. 1 hit.
TIGRFAMsTIGR01345. Malate_syn_G. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB8ERA6_METSB
AccessionPrimary (citable) accession number: B8ERA6
Entry history
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: December 14, 2011
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info