B8EQN3 (RL28_METSB) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L28

Gene names

Name:	rpmB
Ordered Locus Names:	Msil_0325

Organism

Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) [Complete proteome] [HAMAP]

Taxonomic identifier

395965 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Beijerinckiaceae › Methylocella

Protein attributes

Sequence length	96 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L28P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 96	96	50S ribosomal protein L28 HAMAP MF_00373		PRO_1000195932

Sequences

	Sequence		Length	Mass (Da)
	B8EQN3 [UniParc]. Last modified March 3, 2009. Version 1. Checksum: 384BDA9FEC075E77	FASTA	96	10,539
	10 20 30 40 50 60 MSRRCDLTGK AVQTGNLVSH SNHKTRTRFL PNLCNVTLIS DVLQRKVRFR VAVAALRSVE 70 80 90 HRGGLDAFLA KADDAELSLG ARAIKREILK KQAAAS

References

[1]

"Complete sequence of Methylocella silvestris BL2." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Forester B., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Dunfield P.F., Dedysh S.N., Liesack W. , Stott M.B., Smirnova A.V., Alam M., Chen Y., Murrell J.C., Richardson P. Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: BL2 / DSM 15510 / NCIMB 13906.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001280 Genomic DNA. Translation: ACK49304.1.
RefSeq	YP_002360666.1. NC_011666.1.
3D structure databases
ProteinModelPortal	B8EQN3.
ModBase	Search...
Protein-protein interaction databases
STRING	B8EQN3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7091544.
GenomeReviews	Gene locus Msil_0325 in contig CP001280_GR.
KEGG	msl:Msil_0325.
PATRIC	22595923. VBIMetSil55537_0357.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG597003.
OMA	ELSMRAR.
ProtClustDB	PRK00359.
Family and domain databases
HAMAP	MF_00373. Ribosomal_L28. [Tree]
InterPro	IPR001383. Ribosomal_L28. [Graphical view]
KO	K02902.
Pfam	PF00830. Ribosomal_L28. 1 hit. [Graphical view]
TIGRFAMs	TIGR00009. L28. 1 hit.
ProtoNet	Search...

Entry information

Entry name

RL28_METSB

Accession

Primary (citable) accession number: B8EQN3

Entry history

Integrated into UniProtKB/Swiss-Prot:	July 28, 2009
Last sequence update:	March 3, 2009
Last modified:	January 25, 2012
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program