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B8EPK8 (B8EPK8_METSB) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Msil_1244 EMBL ACK50213.1
OrganismMethylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) [Complete proteome] [HAMAP] EMBL ACK50213.1
Taxonomic identifier395965 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBeijerinckiaceaeMethylocella

Protein attributes

Sequence length366 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Sequences

Sequence LengthMass (Da)Tools
B8EPK8 [UniParc].

Last modified March 3, 2009. Version 1.
Checksum: 7ACEECE50A7305B9

FASTA36638,550
        10         20         30         40         50         60 
MSGWITAVYR LRAGAAEVEA RAEAIALEQS VEAPLAAVRD DFVRENIVGR VAAIEDCGGG 

        70         80         90        100        110        120 
WFEARIELAA ATIGYDAGQL LNMLFGNSSL LEDVLLVDAI LPAPLAAAFG GPSHGLAALR 

       130        140        150        160        170        180 
AEAGASGRAL TCSALKPQGV PAAELAELAF ALSMGGLDFL KDDHGLADQT YSRFEARIAA 

       190        200        210        220        230        240 
CAAAVRKARD RTGGRTRYAP SLSGSYPQMR QQLLAARGEG LDAALIAPMI AGCSNFQALR 

       250        260        270        280        290        300 
VEFPDFAFLA HPTMTGRAIS PVLFARLFRL FGADVAIFPN YGGRFGYSPA VCEAIAAALL 

       310        320        330        340        350        360 
SGDDGLKPSI PAPAGGMSVE RTPELLDRYG RDVMLLIGGA LLSAPREALT EQTRRFVEAV 


ASHHYR 

« Hide

References

[1]"Complete sequence of Methylocella silvestris BL2."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Forester B., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Dunfield P.F., Dedysh S.N., Liesack W. expand/collapse author list , Stott M.B., Smirnova A.V., Alam M., Chen Y., Murrell J.C., Richardson P.
Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BL2 / DSM 15510 / NCIMB 13906.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001280 Genomic DNA. Translation: ACK50213.1.
RefSeqYP_002361575.1. NC_011666.1.

3D structure databases

ProteinModelPortalB8EPK8.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING395965.Msil_1244.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACK50213; ACK50213; Msil_1244.
GeneID7092317.
KEGGmsl:Msil_1244.
PATRIC22597975. VBIMetSil55537_1366.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1850.
HOGENOMHOG000230274.
KOK01601.
OMAPIFAHPA.
OrthoDBEOG6MM1J2.

Enzyme and pathway databases

BioCycMSIL395965:GCND-1268-MONOMER.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
InterProIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB8EPK8_METSB
AccessionPrimary (citable) accession number: B8EPK8
Entry history
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: January 22, 2014
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)