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Protein
Submitted name:

Ribulose-bisphosphate carboxylase

Gene

Msil_1195

Organism
Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciMSIL395965:GCND-1219-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose-bisphosphate carboxylaseImported (EC:4.1.1.39Imported)
Gene namesi
Ordered Locus Names:Msil_1195Imported
OrganismiMethylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906)Imported
Taxonomic identifieri395965 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBeijerinckiaceaeMethylocella
ProteomesiUP000002257 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi395965.Msil_1195.

Structurei

3D structure databases

ProteinModelPortaliB8EPF9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini25 – 145121RuBisCO_large_NInterPro annotationAdd
BLAST
Domaini155 – 462308RuBisCO_largeInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiCOG1850. LUCA.
ENOG4105DT1. Bacteria.
HOGENOMiHOG000230831.
KOiK01601.
OMAiFTQDWAS.
OrthoDBiEOG6ZKXMS.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPiMF_01338. RuBisCO_L_type1.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR020888. RuBisCO_lsu.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B8EPF9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTASPPAQPR SRYSAGVMEY REMGYWQPDY VPGETDIIAC FRVTPQEGVD
60 70 80 90 100
PIEASAAVAG ESSTATWTVV WTDRLTASEK YRAKCYRVDP VPNAPGSWFA
110 120 130 140 150
FIAYDLDLFE PGSISNLAAS IIGNVFGFKP LRALRLEDMR FPVAYVKTFQ
160 170 180 190 200
GPATGIVVER ERLDKFGRPL LGATVKPKLG LSGRNYGRVV YEALKGGLDF
210 220 230 240 250
TKDDENINSQ PFMHWRDRFL YCMEAVNRAE AATGEIKGTY LNVTAATMED
260 270 280 290 300
MYERAEFAKE LGSVIIMIDL VIGYTAIQSM AKWARRNDMI LHLHRAGHST
310 320 330 340 350
YTRQKIHGVS FRVIAKWMRL AGVDHIHAGT VVGKLEGDPN TTRGYYDICR
360 370 380 390 400
EDYNPQQLEH GIFFDQHWAS LNKLMPVASG GIHAGQMHQL LALLGEDVVL
410 420 430 440 450
QFGGGTIGHP MGIAAGATAN RVALEAMIFA RNCGRDTLAE GQTILEDAAR
460 470 480
GCTPLRQALD VWKDVSFDYT STDSPDFIPT ATPA
Length:484
Mass (Da):53,508
Last modified:March 3, 2009 - v1
Checksum:i07A90129067ABB20
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001280 Genomic DNA. Translation: ACK50164.1.
RefSeqiWP_012590234.1. NC_011666.1.

Genome annotation databases

EnsemblBacteriaiACK50164; ACK50164; Msil_1195.
KEGGimsl:Msil_1195.
PATRICi22597875. VBIMetSil55537_1316.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001280 Genomic DNA. Translation: ACK50164.1.
RefSeqiWP_012590234.1. NC_011666.1.

3D structure databases

ProteinModelPortaliB8EPF9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi395965.Msil_1195.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACK50164; ACK50164; Msil_1195.
KEGGimsl:Msil_1195.
PATRICi22597875. VBIMetSil55537_1316.

Phylogenomic databases

eggNOGiCOG1850. LUCA.
ENOG4105DT1. Bacteria.
HOGENOMiHOG000230831.
KOiK01601.
OMAiFTQDWAS.
OrthoDBiEOG6ZKXMS.

Enzyme and pathway databases

BioCyciMSIL395965:GCND-1219-MONOMER.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPiMF_01338. RuBisCO_L_type1.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR020888. RuBisCO_lsu.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of the aerobic facultative methanotroph Methylocella silvestris BL2."
    Chen Y., Crombie A., Rahman M.T., Dedysh S.N., Liesack W., Stott M.B., Alam M., Theisen A.R., Murrell J.C., Dunfield P.F.
    J. Bacteriol. 192:3840-3841(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BL2 / DSM 15510 / NCIMB 13906Imported.

Entry informationi

Entry nameiB8EPF9_METSB
AccessioniPrimary (citable) accession number: B8EPF9
Entry historyi
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: December 9, 2015
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.