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B8EN59 (GLGA_METSB) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:Msil_0213
OrganismMethylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) [Complete proteome] [HAMAP]
Taxonomic identifier395965 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBeijerinckiaceaeMethylocella

Protein attributes

Sequence length483 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 483483Glycogen synthase HAMAP-Rule MF_00484
PRO_1000135653

Sites

Binding site181ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
B8EN59 [UniParc].

Last modified March 3, 2009. Version 1.
Checksum: B317FA4AA79A2033

FASTA48351,456
        10         20         30         40         50         60 
MSEISVLAIV SEIFPLIKTG GLADVAGALP AALAGEGIEV ATLVPGYPAV MAQIEYAETV 

        70         80         90        100        110        120 
IDARPLYGAP ARVLRGSAAG LDLFVLDAPH LYDRPGNPYL LPDGRDFPDN PFRFAALCQT 

       130        140        150        160        170        180 
GSALGFGAAP GFLPDIVHAH DWQAGLAAAY LHYDGRERPG TVATIHNLAF QGKYPAELLG 

       190        200        210        220        230        240 
ALGLPPQAFS LEGVEYYGTI GFLKAALALS DRITTVSPTY AAEIRTPEHG MGLDGLLRTR 

       250        260        270        280        290        300 
AERLIGILNG IDDEVWDPSS DPLITEPFDV ETLARRPANK AALQDKFGLD PDPGALLLGV 

       310        320        330        340        350        360 
VSRLSWQKGL DLLLANLDLL ERLGVQLAVL GSGEPELVRQ LLEAAEARPG RVGAVIGYDE 

       370        380        390        400        410        420 
AIAHRIQAGA DAIVIPSRFE PCGLTQLCAL RYGALPIVAR VGGLADTIID ANEMALASGI 

       430        440        450        460        470        480 
GTGLQFSPPT ADMLGATLER AARLWAEPEI WDELIENGML TDVSWRRPAA LYAKLFRDLV 


RER 

« Hide

References

[1]"Complete sequence of Methylocella silvestris BL2."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Forester B., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Dunfield P.F., Dedysh S.N., Liesack W. expand/collapse author list , Stott M.B., Smirnova A.V., Alam M., Chen Y., Murrell J.C., Richardson P.
Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BL2 / DSM 15510 / NCIMB 13906.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001280 Genomic DNA. Translation: ACK49194.1.
RefSeqYP_002360556.1. NC_011666.1.

3D structure databases

ProteinModelPortalB8EN59.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING395965.Msil_0213.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACK49194; ACK49194; Msil_0213.
GeneID7090530.
KEGGmsl:Msil_0213.
PATRIC22595671. VBIMetSil55537_0233.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294941.
KOK00703.
OMAVHCNDWQ.
OrthoDBEOG6JTC6Z.
ProtClustDBPRK14099.

Enzyme and pathway databases

BioCycMSIL395965:GCND-216-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_METSB
AccessionPrimary (citable) accession number: B8EN59
Entry history
Integrated into UniProtKB/Swiss-Prot: July 28, 2009
Last sequence update: March 3, 2009
Last modified: February 19, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways