B8EK45 (B8EK45_METSB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Transcriptional regulator, LysR family EMBL ACK50585.1

Gene names

Ordered Locus Names:

Msil_1637

Organism

Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) [Complete proteome] [HAMAP] EMBL ACK50585.1

Taxonomic identifier

395965 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Beijerinckiaceae › Methylocella

Protein attributes

Sequence length	298 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH lysR-type DNA-binding domain. SAAS SAAS000847

Ontologies

Keywords
Biological process	Transcription Transcription regulation SAAS SAAS000847
Ligand	DNA-binding SAAS SAAS000847
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B8EK45 [UniParc]. Last modified March 3, 2009. Version 1. Checksum: C1C695F737151098	FASTA	298	32,063
	10 20 30 40 50 60 MIEPDWSHYR AFVAVLREGS LSGAARALGL AQPTLGRQIA ELERSLGAAL FIRSPRGLVP 70 80 90 100 110 120 TDAARDIAPH AEAMAAAAGA MMRLASGGTD GASGVVRVTA SDIIGAEVLP ALLGAFRRAH 130 140 150 160 170 180 PAATIELALS NRVEDLLRGD ADIAVRMVRP SQQALVTRHI GAVSLGLYAH RRYLEGAPPL 190 200 210 220 230 240 RSLATLARDH ALIGFDRETP FLREMLTRLP LTRDDFALRA DSDLAQLAAI RAGFGIGFIQ 250 260 270 280 290 HGIARRDPEL IPIFPGEIGF TLEMWLALHE DLRASRRLRL MMDHLAAGLA AYVAQSQP

References

[1]

"Complete sequence of Methylocella silvestris BL2." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Forester B., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Dunfield P.F., Dedysh S.N., Liesack W. , Stott M.B., Smirnova A.V., Alam M., Chen Y., Murrell J.C., Richardson P. Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: BL2 / DSM 15510 / NCIMB 13906.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001280 Genomic DNA. Translation: ACK50585.1.
RefSeq	YP_002361947.1. NC_011666.1.
3D structure databases
ProteinModelPortal	B8EK45.
ModBase	Search...
Protein-protein interaction databases
STRING	B8EK45.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7090994.
GenomeReviews	Gene locus Msil_1637 in contig CP001280_GR.
KEGG	msl:Msil_1637.
PATRIC	22598795. VBIMetSil55537_1771.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG685425.
OMA	HGAGVRG.
ProtClustDB	CLSK2404007.
Family and domain databases
InterPro	IPR005119. LysR_subst-bd. IPR000847. Tscrpt_reg_HTH_LysR. IPR011991. WHTH_trsnscrt_rep_DNA-bd. [Graphical view]
Gene3D	G3DSA:1.10.10.10. Wing_hlx_DNA_bd. 1 hit.
Pfam	PF00126. HTH_1. 1 hit. PF03466. LysR_substrate. 1 hit. [Graphical view]
PRINTS	PR00039. HTHLYSR.
PROSITE	PS50931. HTH_LYSR. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B8EK45_METSB

Accession

Primary (citable) accession number: B8EK45

Entry history

Integrated into UniProtKB/TrEMBL:	March 3, 2009
Last sequence update:	March 3, 2009
Last modified:	December 14, 2011
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)