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B8E7H5

- B8E7H5_SHEB2

UniProt

B8E7H5 - B8E7H5_SHEB2

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Sbal223_2439

Organism
Shewanella baltica (strain OS223)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 37 (01 Oct 2014)
      Sequence version 1 (03 Mar 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciSBAL407976:GJ6Y-2529-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Sbal223_2439Imported
    OrganismiShewanella baltica (strain OS223)Imported
    Taxonomic identifieri407976 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
    ProteomesiUP000002507: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 4343 PotentialImportedAdd
    BLAST
    Chaini44 – 309266 PotentialImportedPRO_5000423782Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi407976.Sbal223_2439.

    Structurei

    3D structure databases

    ProteinModelPortaliB8E7H5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000293070.
    KOiK01971.
    OMAiGKGQFEN.
    OrthoDBiEOG60919Q.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    B8E7H5-1 [UniParc]FASTAAdd to Basket

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    MTHTSPLQDL TFHRFIRFRF FKQRLLLLSL LIFGCLAPVT YAQNSPPSIQ    50
    LATEFDAQQE IHIQDFLVSE KLDGVRGYWN GQALLTRQGN LIAAPTWFIA 100
    NFPNYPLDGE LWLGRGQFEA MSSIVRQTSA KDDDWRKVRF MVFDVPKAGG 150
    DFQHRYQFAL TELSDKSHYL EVIAQFQVDS LEALYQKLDS LVAKGAEGLM 200
    LHRSSATYVS GRNPNLMKLK PYYDAEATVI GHIPGKGQFA GQMGAIRVQT 250
    PDGRVFNIGT GFNLAERQHP PAVGAIITYK YLGLTVNGLP RFASFLRVRV 300
    DIDKIDSQQ 309
    Length:309
    Mass (Da):34,877
    Last modified:March 3, 2009 - v1
    Checksum:i3F096597DD41C033
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001252 Genomic DNA. Translation: ACK46934.1.
    RefSeqiWP_012587829.1. NC_011663.1.
    YP_002358357.1. NC_011663.1.

    Genome annotation databases

    EnsemblBacteriaiACK46934; ACK46934; Sbal223_2439.
    GeneIDi7089402.
    KEGGisbp:Sbal223_2439.
    PATRICi23481161. VBISheBal125792_2521.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001252 Genomic DNA. Translation: ACK46934.1 .
    RefSeqi WP_012587829.1. NC_011663.1.
    YP_002358357.1. NC_011663.1.

    3D structure databases

    ProteinModelPortali B8E7H5.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 407976.Sbal223_2439.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACK46934 ; ACK46934 ; Sbal223_2439 .
    GeneIDi 7089402.
    KEGGi sbp:Sbal223_2439.
    PATRICi 23481161. VBISheBal125792_2521.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000293070.
    KOi K01971.
    OMAi GKGQFEN.
    OrthoDBi EOG60919Q.

    Enzyme and pathway databases

    BioCyci SBAL407976:GJ6Y-2529-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: OS223Imported.

    Entry informationi

    Entry nameiB8E7H5_SHEB2
    AccessioniPrimary (citable) accession number: B8E7H5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 3, 2009
    Last sequence update: March 3, 2009
    Last modified: October 1, 2014
    This is version 37 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3