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B8E7H5

- B8E7H5_SHEB2

UniProt

B8E7H5 - B8E7H5_SHEB2

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Protein
Submitted name: ATP dependent DNA ligase
Gene
Sbal223_2439
Organism
Shewanella baltica (strain OS223)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciSBAL407976:GJ6Y-2529-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Sbal223_2439Imported
OrganismiShewanella baltica (strain OS223)Imported
Taxonomic identifieri407976 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000002507: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 4343 PredictedImported
Add
BLAST
Chaini44 – 309266 PredictedImported
PRO_5000423782Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi407976.Sbal223_2439.

Structurei

3D structure databases

ProteinModelPortaliB8E7H5.

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000293070.
KOiK01971.
OMAiGKGQFEN.
OrthoDBiEOG60919Q.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

B8E7H5-1 [UniParc]FASTAAdd to Basket

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MTHTSPLQDL TFHRFIRFRF FKQRLLLLSL LIFGCLAPVT YAQNSPPSIQ    50
LATEFDAQQE IHIQDFLVSE KLDGVRGYWN GQALLTRQGN LIAAPTWFIA 100
NFPNYPLDGE LWLGRGQFEA MSSIVRQTSA KDDDWRKVRF MVFDVPKAGG 150
DFQHRYQFAL TELSDKSHYL EVIAQFQVDS LEALYQKLDS LVAKGAEGLM 200
LHRSSATYVS GRNPNLMKLK PYYDAEATVI GHIPGKGQFA GQMGAIRVQT 250
PDGRVFNIGT GFNLAERQHP PAVGAIITYK YLGLTVNGLP RFASFLRVRV 300
DIDKIDSQQ 309
Length:309
Mass (Da):34,877
Last modified:March 3, 2009 - v1
Checksum:i3F096597DD41C033
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001252 Genomic DNA. Translation: ACK46934.1.
RefSeqiWP_012587829.1. NC_011663.1.
YP_002358357.1. NC_011663.1.

Genome annotation databases

EnsemblBacteriaiACK46934; ACK46934; Sbal223_2439.
GeneIDi7089402.
KEGGisbp:Sbal223_2439.
PATRICi23481161. VBISheBal125792_2521.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001252 Genomic DNA. Translation: ACK46934.1 .
RefSeqi WP_012587829.1. NC_011663.1.
YP_002358357.1. NC_011663.1.

3D structure databases

ProteinModelPortali B8E7H5.
ModBasei Search...

Protein-protein interaction databases

STRINGi 407976.Sbal223_2439.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACK46934 ; ACK46934 ; Sbal223_2439 .
GeneIDi 7089402.
KEGGi sbp:Sbal223_2439.
PATRICi 23481161. VBISheBal125792_2521.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000293070.
KOi K01971.
OMAi GKGQFEN.
OrthoDBi EOG60919Q.

Enzyme and pathway databases

BioCyci SBAL407976:GJ6Y-2529-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: OS223.

Entry informationi

Entry nameiB8E7H5_SHEB2
AccessioniPrimary (citable) accession number: B8E7H5
Entry historyi
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: September 3, 2014
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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