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Protein
Submitted name:

Pyridoxal-dependent decarboxylase

Gene

Sbal223_2774

Organism
Shewanella baltica (strain OS223)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

  1. carboxy-lyase activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. carboxylic acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciSBAL407976:GJ6Y-2876-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Pyridoxal-dependent decarboxylaseImported
Gene namesi
Ordered Locus Names:Sbal223_2774Imported
OrganismiShewanella baltica (strain OS223)Imported
Taxonomic identifieri407976 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000002507: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi407976.Sbal223_2774.

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000282553.
KOiK01580.
OMAiALGAFCS.
OrthoDBiEOG6MSRZP.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

Sequencei

Sequence statusi: Complete.

B8E5H3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTQKLPRQAT ASEESLLRIF TAPEDAGSTL SIIEQKLSED LAGFLGDSIA
60 70 80 90 100
ALEKPLSEIE TDFQAFEIPT QPRFVSDYTD EIMQNLVAHS VHTAAPSFIG
110 120 130 140 150
HMTSALPYFV LPLSKMMVGL NQNLVKIETS KAFTPLERQV LGMMHHLIYD
160 170 180 190 200
QDTDFYQSWM HSANHSLGAF CSGGTVANIT ALWIARNQLL KADGEFKGVS
210 220 230 240 250
REGLLKALRH YGYDDLAILV SERGHYSLGK AVDLLGIGRD NIISIPTGSD
260 270 280 290 300
NKVDVAKMRQ AALELARKNI KVLAIVGVAG TTETGNVDPL AELAALAKEL
310 320 330 340 350
NCHFHVDAAW GGASLLSNKY RHLLAGIELA DSVTIDAHKQ MYVPMGAGMV
360 370 380 390 400
LFKDPEFAHA IAHHAEYILR RGSKDLGSQT LEGSRPGMAM LVHACLQIIG
410 420 430 440 450
RDGYEILINN SLEKARYFAE QIKAHEDFEL VTEPELCLLT YRYVPARVQA
460 470 480 490 500
AMKLACEQAD TIRVARFNEL LDGLTQFIQK HQREQGKSFV SRTRIQPARY
510 520 530 540
FRQATVVFRV VLANPLTSHD ILNQVLVEQS EIAALDNEFL PALMAMVAQ
Length:549
Mass (Da):60,684
Last modified:March 3, 2009 - v1
Checksum:i5638B35F0290413F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001252 Genomic DNA. Translation: ACK47262.1.
RefSeqiYP_002358685.1. NC_011663.1.

Genome annotation databases

EnsemblBacteriaiACK47262; ACK47262; Sbal223_2774.
GeneIDi7088523.
KEGGisbp:Sbal223_2774.
PATRICi23481873. VBISheBal125792_2865.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001252 Genomic DNA. Translation: ACK47262.1.
RefSeqiYP_002358685.1. NC_011663.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi407976.Sbal223_2774.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACK47262; ACK47262; Sbal223_2774.
GeneIDi7088523.
KEGGisbp:Sbal223_2774.
PATRICi23481873. VBISheBal125792_2865.

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000282553.
KOiK01580.
OMAiALGAFCS.
OrthoDBiEOG6MSRZP.

Enzyme and pathway databases

BioCyciSBAL407976:GJ6Y-2876-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: OS223Imported.

Entry informationi

Entry nameiB8E5H3_SHEB2
AccessioniPrimary (citable) accession number: B8E5H3
Entry historyi
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: March 4, 2015
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.