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Protein

Ribosomal RNA large subunit methyltransferase F

Gene

rlmF

Organism
Shewanella baltica (strain OS223)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Specifically methylates the adenine in position 1618 of 23S rRNA.UniRule annotation

Catalytic activityi

S-adenosyl-L-methionine + adenine(1618) in 23S rRNA = S-adenosyl-L-homocysteine + rRNA containing N6-methyladenine(1618) in 23S rRNA.UniRule annotation

GO - Molecular functioni

Keywordsi

Molecular functionMethyltransferase, Transferase
Biological processrRNA processing
LigandS-adenosyl-L-methionine

Enzyme and pathway databases

BioCyciSBAL407976:G1GU6-140-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosomal RNA large subunit methyltransferase FUniRule annotation (EC:2.1.1.181UniRule annotation)
Alternative name(s):
23S rRNA mA1618 methyltransferaseUniRule annotation
rRNA adenine N-6-methyltransferaseUniRule annotation
Gene namesi
Name:rlmFUniRule annotation
Ordered Locus Names:Sbal223_0131
OrganismiShewanella baltica (strain OS223)
Taxonomic identifieri407976 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
Proteomesi
  • UP000002507 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10001885361 – 365Ribosomal RNA large subunit methyltransferase FAdd BLAST365

Proteomic databases

PRIDEiB8E3W0

Structurei

3D structure databases

ProteinModelPortaliB8E3W0
SMRiB8E3W0
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the methyltransferase superfamily. METTL16/RlmF family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000218605
KOiK06970
OMAiTEFHQGH

Family and domain databases

HAMAPiMF_01848 23SrRNA_methyltr_F, 1 hit
InterProiView protein in InterPro
IPR016909 rRNA_lsu_MeTfrase_F
IPR010286 rRNA_lsu_MeTfrase_F-like
IPR029063 SAM-dependent_MTases
PANTHERiPTHR13393 PTHR13393, 1 hit
PfamiView protein in Pfam
PF05971 Methyltransf_10, 1 hit
PIRSFiPIRSF029038 Mtase_YbiN_prd, 1 hit
SUPFAMiSSF53335 SSF53335, 1 hit

Sequencei

Sequence statusi: Complete.

B8E3W0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSKPAVKSVQ SATAKTATRA VNIRQKVKAP KQAKPEGKGS TKPVKDRPRV
60 70 80 90 100
EIKKALHPRN AHLNGYDFPA LISAFPRLKT FVRPTPYGAL SIDFADPLAV
110 120 130 140 150
KTLNAALLKH HYGIGAWDIP QGALCPPIPG RVDYVHYVAD LLAEGDKSCA
160 170 180 190 200
ISKARVLDIG TGANGIYPIL GSQVYGWQFV ASDISAHSLT NVQSIIEQNP
210 220 230 240 250
ALQGRISLRL QPDDKAVFKG IVQPEERFEL TLCNPPFHAS MAEASEGTKR
260 270 280 290 300
KVNNLQLNRG SSVKAAPKLN FGGQAAELWC QGGERQFLAT MIRESQMFAD
310 320 330 340 350
QCLWFTSLVS KQENLKPCYQ ALAQLKVDTV KTIEMQQGNK ITRVLAWSFQ
360
SAAKRKLWRA EHLAR
Length:365
Mass (Da):40,174
Last modified:March 3, 2009 - v1
Checksum:iF4D2F0C8A21EB5DB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001252 Genomic DNA Translation: ACK44672.1
RefSeqiWP_012586416.1, NC_011663.1

Genome annotation databases

EnsemblBacteriaiACK44672; ACK44672; Sbal223_0131
KEGGisbp:Sbal223_0131

Similar proteinsi

Entry informationi

Entry nameiRLMF_SHEB2
AccessioniPrimary (citable) accession number: B8E3W0
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 28, 2009
Last sequence update: March 3, 2009
Last modified: May 23, 2018
This is version 51 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

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