B8E3E6 (B8E3E6_DICTD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Ribulokinase HAMAP MF_00520 RuleBase RU003455
EC=2.7.1.16 HAMAP MF_00520 RuleBase RU003455

Gene names

Name:	araB HAMAP MF_00520
Ordered Locus Names:	Dtur_1748

Organism

Dictyoglomus turgidum (strain Z-1310 / DSM 6724)

Taxonomic identifier

515635 [NCBI]

Taxonomic lineage

Bacteria › Dictyoglomi › Dictyoglomales › Dictyoglomaceae › Dictyoglomus

Protein attributes

Sequence length	570 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	ATP + L(or D)-ribulose = ADP + L(or D)-ribulose 5-phosphate. HAMAP MF_00520 RuleBase RU003455 SAAS SAAS005929
Pathway	Carbohydrate degradation; L-arabinose degradation via L-ribulose; D-xylulose 5-phosphate from L-arabinose (bacterial route): step 2/3. HAMAP MF_00520 RuleBase RU003455 SAAS SAAS005929
Sequence similarities	Belongs to the ribulokinase family. HAMAP MF_00520 RuleBase RU003455

Ontologies

Keywords
Biological process	Arabinose catabolism HAMAP MF_00520 RuleBase RU003455 SAAS SAAS005929 Carbohydrate metabolism
Ligand	ATP-binding HAMAP MF_00520 SAAS SAAS005929 Nucleotide-binding
Molecular function	Kinase HAMAP MF_00520 RuleBase RU003455 SAAS SAAS005929 EMBL ACK43020.1 Transferase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	L-arabinose catabolic process Inferred from electronic annotation. Source: HAMAP
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ribulokinase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B8E3E6 [UniParc]. Last modified March 3, 2009. Version 1. Checksum: 66A4664F0860AFB9	FASTA	570	63,623
	10 20 30 40 50 60 MGKYAIGLDY GTNSVRALVV DISNGEELGT YVYNYEHGED GVILDPKNPN VARQHPADYI 70 80 90 100 110 120 KGLEVTIEGA LREAEKNSKE FSRKDVIGIG IDTTGSTPLP IDKDGVPLAF HEEFKDNINA 130 140 150 160 170 180 LAWLWKDHSS YEEAEEITRL ANEKGYPYLR KYGGVYSSEW FFSKILHCLR VDPKVFDSAY 190 200 210 220 230 240 TWVEICDYIP AVLTGKTKPH EIKRSICAAG HKAMFNLEWG GLPSKEFLSQ LDPKLADLRD 250 260 270 280 290 300 RLYDKAYTSD VPFGYISEYY ADKFGLNKDV VVAVGAFDAH MGGVGAGIKP GVLVKVIGTS 310 320 330 340 350 360 TCDMMVVPNT EKLPDIPGLC GIVDGSILPG YYGLEAGQSA VGDIFNWFVK YLTPREYFGE 370 380 390 400 410 420 EGKNKDLHQL LTEKAEKLKT GESGLLALDW NNGNRTVLVD AKLTGLLIGQ TLHTRPEEIY 430 440 450 460 470 480 RALIEATAFG ARVIMERFEE YGVKVNEVIA CGGIPEKNPF MMQVYADILG RTIKISYSSQ 490 500 510 520 530 540 TPALGAAIFG AVAAGYEKSG YRNVEEAQKA ICRVKDKVYY PRQEDSEIYN KLYKLYRELH 550 560 570 DIFGTKEASY NLYHVMKELI EIRDKVKGVK

References

[1]

"Complete sequence of Dictyoglomus turgidum DSM 6724." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Mead D. Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Z-1310 / DSM 6724.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001251 Genomic DNA. Translation: ACK43020.1.
RefSeq	YP_002353634.1. NC_011661.1.
3D structure databases
ProteinModelPortal	B8E3E6.
ModBase	Search...
Protein-protein interaction databases
STRING	B8E3E6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7082268.
GenomeReviews	Gene locus Dtur_1748 in contig CP001251_GR.
KEGG	dtu:Dtur_1748.
PATRIC	21812312. VBIDicTur93964_1800.
Phylogenomic databases
HOGENOM	HBG312681.
OMA	NGRRTPD.
PhylomeDB	B8E3E6.
ProtClustDB	CLSK2405085.
Family and domain databases
HAMAP	MF_00520. Ribulokinase. [Tree]
InterPro	IPR000577. Carb_kinase_FGGY. IPR018485. Carb_kinase_FGGY_C. IPR018484. Carb_kinase_FGGY_N. IPR005929. L_ribulokin. [Graphical view]
KO	K00853.
PANTHER	PTHR10196. FGGY_kin. 1 hit.
Pfam	PF02782. FGGY_C. 1 hit. PF00370. FGGY_N. 1 hit. [Graphical view]
TIGRFAMs	TIGR01234. L-ribulokinase. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B8E3E6_DICTD

Accession

Primary (citable) accession number: B8E3E6

Entry history

Integrated into UniProtKB/TrEMBL:	March 3, 2009
Last sequence update:	March 3, 2009
Last modified:	December 14, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)