B8E3B3 (B8E3B3_DICTD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Endo-1,4-beta-xylanase EMBL ACK42987.1
EC=3.2.1.8 EMBL ACK42987.1

Gene names

Ordered Locus Names:

Dtur_1715

Organism

Dictyoglomus turgidum (strain Z-1310 / DSM 6724)

Taxonomic identifier

515635 [NCBI]

Taxonomic lineage

Bacteria › Dictyoglomi › Dictyoglomales › Dictyoglomaceae › Dictyoglomus

Protein attributes

Sequence length	1037 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 10 (cellulase F) family. RuleBase RU003432

Ontologies

Keywords
Biological process	Xylan degradation EMBL ACK42987.1
Domain	Signal EMBL ACK42987.1
Molecular function	Glycosidase RuleBase RU003432 EMBL ACK42987.1 Hydrolase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	carbohydrate catabolic process Inferred from electronic annotation. Source: InterPro xylan catabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro endo-1,4-beta-xylanase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 25	25	Potential EMBL ACK42987.1
	Chain	26 – 1037	1012	Potential EMBL ACK42987.1		PRO_5000423441

Sequences

	Sequence		Length	Mass (Da)
	B8E3B3 [UniParc]. Last modified March 3, 2009. Version 1. Checksum: F6290678A372F129	FASTA	1,037	118,689
	10 20 30 40 50 60 MLKKRFSLLF LITFLLILSI TIGSEDLTLY FSFENGSEEG FLGTSERVKL SIVEDVVLDG 70 80 90 100 110 120 KYALKVHNRL SSWDGCRVSL TYNLLPEMNY LVSAFVYHTS DKPQPFQIVA RIKDIVGERF 130 140 150 160 170 180 ELIGETIAMP KVWKEIKGNF KFNYSVYLEA LDLMIVSPNE SGFDFYVDKI QVLGPNKVSS 190 200 210 220 230 240 PGSVVNSTFE SGTVENWEAR GDGVKILVRD NVAKTGKYSL FVTGRTRSWH GAQINLSKIL 250 260 270 280 290 300 ETGKSYDISV WVYQSSGETQ KITLTMQRKF DIDEKTRYET IVWQKSIPDK TWVELSGSYN 310 320 330 340 350 360 VPLNVKIEEL ILYVESPNTN LEFYVDDVKV TDRTLVLGQP EWEIPSLAEM FKGYFKIGVA 370 380 390 400 410 420 IPFKVLINPV EAKMVVKHFN SITSENEMKP ESLQPREGEF DFSKADAYVK FAEENGLVVR 430 440 450 460 470 480 GHTLVWHSQT PNWFFVDKDG KPASKELLLK RLENHIKTVV GRYKGRVYAW DVVNEAIDEA 490 500 510 520 530 540 QPDGFRRSKW FEILGPEYIE KAFIWAHEAD PNAKLFYNDY NTEIPAKREF IYKLVKSLKE 550 560 570 580 590 600 KGVPIHGVGL QCHINISWPE IEEIENTIKL FSTIPGIEIH ITELDMSVYT QAGEEYKTLP 610 620 630 640 650 660 RDVAVRQGYR YRKLFDMLKK YKNVVTNVTF WGLKDDYSWL NQRGRFNYPL LFDKDYQAKL 670 680 690 700 710 720 AYWALVSPNV LPPLIQSAKM ASGQAVVDGI EDKSYKSAIP VIINDGERDV AVVKPIWYMS 730 740 750 760 770 780 KIFVFAEVFD GRKDDTDCLT VFVDQNNAKS PYLQSDDVYF KFYRNGKIES NFAPMLKNYT 790 800 810 820 830 840 IREKETGYTI ECEIQIYAIP IGKGSKIGMD FSMIDGEKVV SWSDHSNQQL LSTIRYGTLE 850 860 870 880 890 900 LEEAVKLAQA KKGSPVVDAL MDDLYKSVDP IETETAVMGK IEKVKGKAWI LWDEDHIYLY 910 920 930 940 950 960 AEVSDDDLDD TATNPWEQDS FEIFIDENNA KTASYQADDA QYRVNFKNVQ TFGTGANAEY 970 980 990 1000 1010 1020 INSATRLLRD GEKVIGYAVE VAIKMKTKRL KVGEVIGFDI QVNNASKGMR IGIYTWNDPV 1030 GDNWRDTRRF GNLELIQ

References

[1]

"Complete sequence of Dictyoglomus turgidum DSM 6724." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Mead D. Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Z-1310 / DSM 6724.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001251 Genomic DNA. Translation: ACK42987.1.
RefSeq	YP_002353601.1. NC_011661.1.
3D structure databases
ProteinModelPortal	B8E3B3.
ModBase	Search...
Protein-protein interaction databases
STRING	B8E3B3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7082235.
GenomeReviews	Gene locus Dtur_1715 in contig CP001251_GR.
KEGG	dtu:Dtur_1715.
PATRIC	21812244. VBIDicTur93964_1766.
Phylogenomic databases
HOGENOM	HBG465764.
OMA	AKLAYWA.
ProtClustDB	CLSK874945.
Family and domain databases
InterPro	IPR010502. Carb-bd_dom_fam9. IPR008960. Carb-bd_dom_fam9-like. IPR015922. Carb-bd_dom_fam9-like_subgr. IPR003305. CenC_carb-bd. IPR008979. Galactose-bd-like. IPR001000. Glyco_hydro_10. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:2.60.40.1190. CBD9. 2 hits. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01181.
Pfam	PF02018. CBM_4_9. 2 hits. PF06452. DUF1083. 2 hits. PF00331. Glyco_hydro_10. 1 hit. [Graphical view]
PRINTS	PR00134. GLHYDRLASE10.
SMART	SM00633. Glyco_10. 1 hit. [Graphical view]
SUPFAM	SSF49344. CBD9-like. 2 hits. SSF49785. Gal_bind_like. 2 hits. SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS00591. GLYCOSYL_HYDROL_F10. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B8E3B3_DICTD

Accession

Primary (citable) accession number: B8E3B3

Entry history

Integrated into UniProtKB/TrEMBL:	March 3, 2009
Last sequence update:	March 3, 2009
Last modified:	December 14, 2011
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)