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B8E1V0 (B8E1V0_DICTD) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Pectate lyase/Amb allergen EMBL ACK41733.1
Gene names
Ordered Locus Names:Dtur_0431
OrganismDictyoglomus turgidum (strain Z-1310 / DSM 6724)
Taxonomic identifier515635 [NCBI]
Taxonomic lineageBacteria › Dictyoglomi › Dictyoglomales › Dictyoglomaceae › Dictyoglomus

Protein attributes

Sequence length527 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 2 fibronectin type-III domains. RuleBase RU000718

Ontologies

Keywords
   DomainSignal EMBL ACK41733.1
   Molecular functionLyase EMBL ACK41733.1
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Molecular functionlyase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2626 Potential EMBL ACK41733.1
Chain27 – 527501 Potential EMBL ACK41733.1
PRO_5000423360

Sequences

Sequence LengthMass (Da)Tools
B8E1V0 [UniParc].

Last modified March 3, 2009. Version 1.
Checksum: FAF6BEACB4CA314B

FASTA52759,210
        10         20         30         40         50         60 
MLRSKVKWII LLMFLLQIVS GCSSKQTTDS TNIPPIAVPT NLKAEILSEK RVLLTWQDNS 

        70         80         90        100        110        120 
NNEDGFKVER KEEEKDWIQI AVVGFNTVNY IDSNLTPGKT YSYRVRAYNS SVNSDYSNEV 

       130        140        150        160        170        180 
SITTPLIIAP ELSLSIDENN HVKLYWTTKS EVTQGYVIDK KEENGDWQEL LTLDVSSKSY 

       190        200        210        220        230        240 
TDPDVISGKV YWYRIKAFSS NIESDYSEAY VYVPLINPSN SPDFSLVGFA TLNGGTTGGE 

       250        260        270        280        290        300 
GGTVVYVSTG VELQNEINKG GPRIIYVNGT ITPQNNNNKY VIEVKNVSNI SIIGVGTYGE 

       310        320        330        340        350        360 
LNGVGIKINN ANNIVVRNLI IHNVKDPAIA TQGPDCITIS GPARNIWIDH CELYNQFQGI 

       370        380        390        400        410        420 
DKDYYDGLLD INGDVSYVTV SWCYFHDSWK TSLIGSSDTD NYNRTITYHH NWFRNCNSRL 

       430        440        450        460        470        480 
PSYRFGEGHI FNNYYQDIAG SAINSRMGAK LRIEHNYFEN VRNPIGSWDS SQIGYWDLAG 

       490        500        510        520 
NVFVNCSGSI PETSTCYYKP SYDYSLDSVE RVKEIVTQYA GVGKITK

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References

[1]"Complete sequence of Dictyoglomus turgidum DSM 6724."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Mead D.
Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Z-1310 / DSM 6724.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001251 Genomic DNA. Translation: ACK41733.1.
RefSeqYP_002352347.1. NC_011661.1.

3D structure databases

ProteinModelPortalB8E1V0.
ModBaseSearch...

Protein-protein interaction databases

STRINGB8E1V0.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7082452.
GenomeReviewsGene locus Dtur_0431 in contig CP001251_GR.
KEGGdtu:Dtur_0431.
PATRIC21809518. VBIDicTur93964_0455.

Phylogenomic databases

PhylomeDBB8E1V0.
ProtClustDBCLSK2406777.

Family and domain databases

InterProIPR002022. Amb_allergen.
IPR003961. Fibronectin_type3.
IPR013783. Ig-like_fold.
IPR006626. PbH1.
IPR012334. Pectin_lyas_fold.
IPR011050. Pectin_lyase_fold/virulence.
[Graphical view]
Gene3DG3DSA:2.60.40.10. Ig-like_fold. 2 hits.
G3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
KOK01728.
PfamPF00041. fn3. 1 hit.
PF00544. Pec_lyase_C. 1 hit.
[Graphical view]
SMARTSM00656. Amb_all. 1 hit.
SM00060. FN3. 2 hits.
SM00710. PbH1. 3 hits.
[Graphical view]
SUPFAMSSF49265. FN_III-like. 2 hits.
SSF51126. Pectin_lyas_like. 1 hit.
PROSITEPS50853. FN3. 2 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB8E1V0_DICTD
AccessionPrimary (citable) accession number: B8E1V0
Entry history
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: December 14, 2011
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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