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B8DUR9 (B8DUR9_BIFA0) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length500 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Keywords
   Molecular functionGlycosidase EMBL ACL29748.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionalpha-amylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

calcium ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B8DUR9 [UniParc].

Last modified March 3, 2009. Version 1.
Checksum: 7173B532435E5BD5

FASTA50056,022
        10         20         30         40         50         60 
MAIDKPNHET MLQCFEWYLP ESHNLWRWLS SQAPSVAHAG FTTAWLPPAY KGQAGDSDVG 

        70         80         90        100        110        120 
YGVYDMYDLG EFDAKGSVPT KYGSRMEYLQ AIRAMQGNGV RVFADIVFNH RMGADGTEPV 

       130        140        150        160        170        180 
RTHEVNVDDR TRSDSTVVER TLNTVYDFPE RGGVYSTFKW NWSDFTGTDY TTDDGTTGIM 

       190        200        210        220        230        240 
RFDGKQWSDN VSHERGNFDY IMGDDVDVNE PEVARELTDW GIWYTTTTGV DGFRLDAVKS 

       250        260        270        280        290        300 
IDAGFFAPWL RTMQRYGNHP GIAVGEYWSG DASELTSYLH DCNHCMMLFD VALHFRFEQA 

       310        320        330        340        350        360 
SKNPEGFDLR GLAADTLYER EPTYACTFVD NHDTQPGQAL ESWVQPWFKP LAYACILLRD 

       370        380        390        400        410        420 
NVLPCVFFGD YYGVPHDLIP PMRFLPHMVW IRAHLLGDQV EAQPGDTAHS LCWVVEGNHP 

       430        440        450        460        470        480 
VCVVLNTGSS EVHRQVRNAA LASHTLIDVC HPDAPATTDT QGQGMMRCPP RSCAIYIDAD 

       490        500 
DYGVMLEALS GTPAAGTVCA 

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References

[1]"Genome sequence of the probiotic bacterium Bifidobacterium animalis subsp. lactis AD011."
Kim J.F., Jeong H., Yu D.S., Choi S.H., Hur C.G., Park M.S., Yoon S.H., Kim D.W., Ji G.E., Park H.S., Oh T.K.
J. Bacteriol. 191:678-679(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: AD011 EMBL ACL29748.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001213 Genomic DNA. Translation: ACL29748.1.
RefSeqYP_002470324.1. NC_011835.1.

3D structure databases

ProteinModelPortalB8DUR9.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING442563.BLA_1466.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACL29748; ACL29748; BLA_1466.
GeneID7264870.
KEGGbla:BLA_1466.
PATRIC21105952. VBIBifAni98964_1534.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000094847.
KOK01176.
OMAFFHWYYP.
OrthoDBEOG65QWH3.
ProtClustDBCLSK2508421.

Enzyme and pathway databases

BioCycBANI442563:GHG0-1458-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR013776. A-amylase_thermo.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFPIRSF001021. Alph-amls_thrmst. 1 hit.
PRINTSPR00110. ALPHAAMYLASE.
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB8DUR9_BIFA0
AccessionPrimary (citable) accession number: B8DUR9
Entry history
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: April 16, 2014
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)