Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Putative sporulation transcription regulator WhiA

Gene

whiA

Organism
Bifidobacterium animalis subsp. lactis (strain AD011)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

May be required for sporulation.UniRule annotation

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi282 – 315H-T-H motifUniRule annotationAdd BLAST34

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
Putative sporulation transcription regulator WhiAUniRule annotation
Gene namesi
Name:whiAUniRule annotation
Ordered Locus Names:BLA_1367
OrganismiBifidobacterium animalis subsp. lactis (strain AD011)
Taxonomic identifieri442563 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaBifidobacterialesBifidobacteriaceaeBifidobacterium
Proteomesi
  • UP000002456 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003764471 – 320Putative sporulation transcription regulator WhiAAdd BLAST320

Structurei

3D structure databases

SMRiB8DUH3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the WhiA transcriptional regulatory family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000040188
KOiK09762
OMAiCCRKAEV

Family and domain databases

Gene3Di1.10.10.10, 1 hit
3.10.28.10, 1 hit
HAMAPiMF_01420 HTH_type_WhiA, 1 hit
InterProiView protein in InterPro
IPR027434 Homing_endonucl
IPR003802 Sporulation_regulator_WhiA
IPR023054 Sporulation_regulator_WhiA_C
IPR036388 WH-like_DNA-bd_sf
IPR033981 WhiA-like
PANTHERiPTHR37307 PTHR37307, 1 hit
PfamiView protein in Pfam
PF02650 HTH_WhiA, 1 hit
SUPFAMiSSF55608 SSF55608, 1 hit
TIGRFAMsiTIGR00647 DNA_bind_WhiA, 1 hit

Sequencei

Sequence statusi: Complete.

B8DUH3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALLDEVKSE LSNIDGGSPA VQKAQVTSML YFGRGFRKVQ RESSTQIIVQ
60 70 80 90 100
PQFDSMEAAH WLQETIESLY KIPAALKSVD VKTPQGSMRR YAVDVGARAG
110 120 130 140 150
FALAVRTGMI DPRLNRIVRG LPTDLSNGNI AQIKGVWRGA FMSAGVLSDP
160 170 180 190 200
DKPSALEIIC PNEETADSLI AMGQRLGIRA AKHTVRSSVR VHLSDPDAIE
210 220 230 240 250
RLLTMMGASS TVRDWTGKRP DTESHHRANR LANFDDANMR RSAKAAAEAV
260 270 280 290 300
VKVQHAFDVL GDDIPQNLRA AGQLRIDHPD FSLEELGRAA RPQISKDAVA
310 320
GRIRRLLQRA EKAEQDAAMA
Length:320
Mass (Da):35,026
Last modified:March 3, 2009 - v1
Checksum:i9493028DDC309FC5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001213 Genomic DNA Translation: ACL29652.1
RefSeqiWP_004217922.1, NC_011835.1

Genome annotation databases

EnsemblBacteriaiACL29652; ACL29652; BLA_1367
GeneIDi29695549
KEGGibla:BLA_1367

Similar proteinsi

Entry informationi

Entry nameiWHIA_BIFA0
AccessioniPrimary (citable) accession number: B8DUH3
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 26, 2009
Last sequence update: March 3, 2009
Last modified: March 28, 2018
This is version 50 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health