B8DSW1 (HIS4_BIFA0) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 32.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase EC=5.3.1.16 Alternative name(s): Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase | ||||
| Gene names |
| ||||
| Organism | Bifidobacterium animalis subsp. lactis (strain AD011) [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 442563 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Actinobacteria › Actinobacteridae › Bifidobacteriales › Bifidobacteriaceae › Bifidobacterium › ![]() |
Protein attributes
| Sequence length | 242 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Catalytic activity | 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide = 5-((5-phospho-1-deoxyribulos-1-ylamino)methylideneamino)-1-(5-phosphoribosyl)imidazole-4-carboxamide. HAMAP-Rule MF_01014 |
| Pathway | Amino-acid biosynthesis; L-histidine biosynthesis; L-histidine from 5-phospho-alpha-D-ribose 1-diphosphate: step 4/9. HAMAP-Rule MF_01014 |
| Subcellular location | Cytoplasm By similarity. |
| Sequence similarities | Belongs to the HisA/HisF family. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Amino-acid biosynthesis Histidine biosynthesis |
| Cellular component | Cytoplasm |
| Molecular function | Isomerase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological_process | histidine biosynthetic process Inferred from electronic annotation. Source: HAMAP tryptophan biosynthetic processInferred from electronic annotation. Source: InterPro |
| Cellular_component | cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular_function | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity Inferred from electronic annotation. Source: HAMAP phosphoribosylanthranilate isomerase activityInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 242 | 242 | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase HAMAP-Rule MF_01014 | PRO_1000148953 | |||||
Sites | |||||||||
| Active site | 10 | 1 | Proton acceptor By similarity | ||||||
| Active site | 131 | 1 | Proton donor By similarity | ||||||
Sequences
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References
| [1] | "Genome sequence of the probiotic bacterium Bifidobacterium animalis subsp. lactis AD011." Kim J.F., Jeong H., Yu D.S., Choi S.-H., Hur C.-G., Park M.-S., Yoon S.H., Kim D.-W., Ji G.E., Park H.-S., Oh T.K. J. Bacteriol. 191:678-679(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: AD011. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP001213 Genomic DNA. Translation: ACL29090.1. |
| RefSeq | YP_002469666.1. NC_011835.1. |
3D structure databases | |
| ProteinModelPortal | B8DSW1. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | 442563.BLA_0798. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblBacteria | ACL29090; ACL29090; BLA_0798. |
| GeneID | 7264205. |
| KEGG | bla:BLA_0798. |
| PATRIC | 21104499. VBIBifAni98964_0831. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| eggNOG | COG0106. |
| HOGENOM | HOG000224614. |
| KO | K01814. K01817. |
| OMA | CARYVVT. |
| ProtClustDB | PRK14024. |
Enzyme and pathway databases | |
| BioCyc | BANI442563:GHG0-793-MONOMER. |
| UniPathway | UPA00031; UER00009. |
Family and domain databases | |
| Gene3D | 3.20.20.70. 1 hit. |
| HAMAP | MF_01014. HisA. |
| InterPro | IPR013785. Aldolase_TIM. IPR006062. His_biosynth. IPR010188. HisA_TrpF. IPR023016. Isoase_HisA. IPR011060. RibuloseP-bd_barrel. [Graphical view] |
| Pfam | PF00977. His_biosynth. 1 hit. [Graphical view] |
| SUPFAM | SSF51366. RibP_bind_barrel. 1 hit. |
| TIGRFAMs | TIGR01919. hisA-trpF. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | HIS4_BIFA0 | ||||||||
| Accession | Primary (citable) accession number: B8DSW1 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Prokaryotic Protein Annotation Program | ||||||||
Relevant documents
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

Clusters with
