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B8DQ65 (B8DQ65_DESVM) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length238 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Function

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity.

Catalytic activity

2 superoxide + 2 H+ = O2 + H2O2.

Sequence similarities

Belongs to the iron/manganese superoxide dismutase family. RuleBase RU004477

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3535 Potential EMBL ACL08929.1
Chain36 – 238203 Potential EMBL ACL08929.1
PRO_5000423077

Sequences

Sequence LengthMass (Da)Tools
B8DQ65 [UniParc].

Last modified March 3, 2009. Version 1.
Checksum: A3527A4CF6AD5BDD

FASTA23825,535
        10         20         30         40         50         60 
MPSSFTRRCF MSLCASAAVV AAGTRLLGPT VAHAADAPDA FPMPPLPYPE NGLEPAISAR 

        70         80         90        100        110        120 
TISFHYGKHT AAYYGNLNKA VAGTPMATMK LEDVIKSVAG DPAKAGLFNN AAQSWNHTFY 

       130        140        150        160        170        180 
WAGMKPGGGG TPPAKVADAL SAAFGSVDAC VTQLSDAAKT QFASGWAWLA KGRENGKDVL 

       190        200        210        220        230 
KVLKTGNAET PITQGYTPIL TIDVWEHAYY LDYQNKRPDY VQAFFDKLVN WDEVAKRL 

« Hide

References

[1]"Complete sequence of Desulfovibrio vulgaris str. 'Miyazaki F'."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Hazen T.C., Richardson P.
Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Miyazaki F / DSM 19637.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001197 Genomic DNA. Translation: ACL08929.1.
RefSeqYP_002436397.1. NC_011769.1.

3D structure databases

ProteinModelPortalB8DQ65.
SMRB8DQ65. Positions 40-238.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING883.DvMF_1986.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACL08929; ACL08929; DvMF_1986.
GeneID7173905.
KEGGdvm:DvMF_1986.
PATRIC21774209. VBIDesVul86729_2124.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0605.
HOGENOMHOG000013584.
KOK04564.
OMAAKTQFAS.
ProtClustDBCLSK705766.

Enzyme and pathway databases

BioCycDVUL883:GCJ5-2039-MONOMER.

Family and domain databases

InterProIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
IPR006311. TAT_signal.
[Graphical view]
PANTHERPTHR11404. PTHR11404. 1 hit.
PfamPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFPIRSF000349. SODismutase. 1 hit.
PRINTSPR01703. MNSODISMTASE.
SUPFAMSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEPS00088. SOD_MN. 1 hit.
PS51318. TAT. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB8DQ65_DESVM
AccessionPrimary (citable) accession number: B8DQ65
Entry history
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: October 16, 2013
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)