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Protein

Superoxide dismutase

Gene

DvMF_1986

Organism
Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi65Divalent metal cationUniRule annotation1
Metal bindingi117Divalent metal cationUniRule annotation1
Metal bindingi203Divalent metal cationUniRule annotation1
Metal bindingi207Divalent metal cationUniRule annotation1

GO - Molecular functioni

Keywordsi

Molecular functionOxidoreductaseUniRule annotationImported
LigandMetal-bindingUniRule annotation

Enzyme and pathway databases

BioCyciDVUL883:G1GTY-2025-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:DvMF_1986Imported
OrganismiDesulfovibrio vulgaris (strain Miyazaki F / DSM 19637)Imported
Taxonomic identifieri883 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfovibrionaceaeDesulfovibrio
Proteomesi
  • UP000001361 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 34Sequence analysisAdd BLAST34
ChainiPRO_500287080835 – 238Superoxide dismutaseSequence analysisAdd BLAST204

Interactioni

Protein-protein interaction databases

STRINGi883.DvMF_1986

Structurei

3D structure databases

ProteinModelPortaliB8DQ65
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini41 – 125Sod_Fe_NInterPro annotationAdd BLAST85
Domaini132 – 237Sod_Fe_CInterPro annotationAdd BLAST106

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4105CK4 Bacteria
COG0605 LUCA
HOGENOMiHOG000013584
KOiK04564
OMAiKWGSFDK
OrthoDBiPOG091H03Q7

Family and domain databases

Gene3Di1.10.287.990, 1 hit
2.40.500.20, 1 hit
InterProiView protein in InterPro
IPR001189 Mn/Fe_SOD
IPR019833 Mn/Fe_SOD_BS
IPR019832 Mn/Fe_SOD_C
IPR019831 Mn/Fe_SOD_N
IPR036324 Mn/Fe_SOD_N_sf
IPR036314 SOD_C_sf
IPR006311 TAT_signal
PfamiView protein in Pfam
PF02777 Sod_Fe_C, 1 hit
PF00081 Sod_Fe_N, 1 hit
PIRSFiPIRSF000349 SODismutase, 1 hit
PRINTSiPR01703 MNSODISMTASE
SUPFAMiSSF46609 SSF46609, 1 hit
SSF54719 SSF54719, 1 hit
PROSITEiView protein in PROSITE
PS00088 SOD_MN, 1 hit
PS51318 TAT, 1 hit

Sequencei

Sequence statusi: Complete.

B8DQ65-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPSSFTRRCF MSLCASAAVV AAGTRLLGPT VAHAADAPDA FPMPPLPYPE
60 70 80 90 100
NGLEPAISAR TISFHYGKHT AAYYGNLNKA VAGTPMATMK LEDVIKSVAG
110 120 130 140 150
DPAKAGLFNN AAQSWNHTFY WAGMKPGGGG TPPAKVADAL SAAFGSVDAC
160 170 180 190 200
VTQLSDAAKT QFASGWAWLA KGRENGKDVL KVLKTGNAET PITQGYTPIL
210 220 230
TIDVWEHAYY LDYQNKRPDY VQAFFDKLVN WDEVAKRL
Length:238
Mass (Da):25,535
Last modified:March 3, 2009 - v1
Checksum:iA3527A4CF6AD5BDD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001197 Genomic DNA Translation: ACL08929.1
RefSeqiWP_012613104.1, NC_011769.1

Genome annotation databases

EnsemblBacteriaiACL08929; ACL08929; DvMF_1986
KEGGidvm:DvMF_1986

Similar proteinsi

Entry informationi

Entry nameiB8DQ65_DESVM
AccessioniPrimary (citable) accession number: B8DQ65
Entry historyiIntegrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: March 28, 2018
This is version 55 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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