B8DN21 (B8DN21_DESVM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
AMP-dependent synthetase and ligase EMBL ACL06965.1

Gene names

Ordered Locus Names:

DvMF_0003

Organism

Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) [Complete proteome] [HAMAP] EMBL ACL06965.1

Taxonomic identifier

883 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Deltaproteobacteria › Desulfovibrionales › Desulfovibrionaceae › Desulfovibrio › Desulfovibrio vulgaris

Protein attributes

Sequence length	557 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ACL06965.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	ligase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B8DN21 [UniParc]. Last modified March 3, 2009. Version 1. Checksum: 86C1F1A33039193F	FASTA	557	61,243
	10 20 30 40 50 60 MTYTTKFTAK DYKEFCATFR IDAPDTFNFA FDVLDPIAAA DPGRLCIAHV DDAGVRRDYT 70 80 90 100 110 120 FAWMAEASAK LANALRLRGI RKGDRVMLVL YRRIEFWVSM LALHRLGAVA IPAPAQLTPK 130 140 150 160 170 180 DIVFRVERAK TRCVIVDHSI TERVEAARPD CPGLAVCVQV GGDALPRGWV DYDTIFTPAE 190 200 210 220 230 240 ARFPRPESPL EFAGGEDPLL IFFSSGTTGM PKMVEHVHTY PLGHLLTGMY WHDLVPGDLH 250 260 270 280 290 300 LTLADTGWGK AVWGKFYGQW MAGASVFVYD FRGKFEPAAL LDVLAAHAVT TFCAPPTVYR 310 320 330 340 350 360 FLVRQDLSAY DLSKLRHCTT AGELLNDSVF HDWKAATGLE IHEGYGQTET TLQIATLPCM 370 380 390 400 410 420 TPKAGSIGRP MPGWDVVLQD AAGNICPPGE EGEICVRVAE GLPVGLFRGY LEEPEKTASV 430 440 450 460 470 480 MFGGYYHTGD KAWMDEDGYY WFLGRVDDLI KSSGYRIGPF EVESALVAHP AVVEAAVTGV 490 500 510 520 530 540 PDPLRGQAVK ATVVLAAGYT ASDALTKELQ DHVKKVTAPY KYPRIIDYVA ELPKTISGKI 550 KRAEIRERDQ QASGPGA

References

[1]

"Complete sequence of Desulfovibrio vulgaris str. 'Miyazaki F'." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Hazen T.C., Richardson P. Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Miyazaki F / DSM 19637.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001197 Genomic DNA. Translation: ACL06965.1.
RefSeq	YP_002434433.1. NC_011769.1.
3D structure databases
ProteinModelPortal	B8DN21.
ModBase	Search...
Protein-protein interaction databases
STRING	883.DvMF_0003.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACL06965; ACL06965; DvMF_0003.
GeneID	7171870.
KEGG	dvm:DvMF_0003.
PATRIC	21769871. VBIDesVul86729_0004.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0365.
HOGENOM	HOG000229982.
KO	K01895.
OMA	HKVTSFC.
ProtClustDB	CLSK705664.
Family and domain databases
InterPro	IPR020845. AMP-binding_CS. IPR000873. AMP-dep_Synth/Lig. IPR025110. DUF4009. [Graphical view]
Pfam	PF00501. AMP-binding. 1 hit. PF13193. DUF4009. 1 hit. [Graphical view]
PROSITE	PS00455. AMP_BINDING. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B8DN21_DESVM

Accession

Primary (citable) accession number: B8DN21

Entry history

Integrated into UniProtKB/TrEMBL:	March 3, 2009
Last sequence update:	March 3, 2009
Last modified:	May 1, 2013
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)