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B8DN21

- B8DN21_DESVM

UniProt

B8DN21 - B8DN21_DESVM

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Protein
Submitted name: AMP-dependent synthetase and ligase
Gene
DvMF_0003
Organism
Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ligase activity Source: UniProtKB-KW
Complete GO annotation...

GO - Biological processi

    Complete GO annotation...

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciDVUL883:GCJ5-3-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    AMP-dependent synthetase and ligaseImported
    Gene namesi
    Ordered Locus Names:DvMF_0003Imported
    OrganismiDesulfovibrio vulgaris (strain Miyazaki F / DSM 19637)Imported
    Taxonomic identifieri883 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfovibrionaceaeDesulfovibrio
    ProteomesiUP000001361: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi883.DvMF_0003.

    Structurei

    3D structure databases

    ProteinModelPortaliB8DN21.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG0365.
    HOGENOMiHOG000229982.
    KOiK01895.
    OMAiGEICVRV.
    OrthoDBiEOG60GRR8.

    Family and domain databases

    InterProiIPR025110. AMP-bd_C.
    IPR020845. AMP-binding_CS.
    IPR000873. AMP-dep_Synth/Lig.
    [Graphical view]
    PfamiPF00501. AMP-binding. 1 hit.
    PF13193. AMP-binding_C. 1 hit.
    [Graphical view]
    PROSITEiPS00455. AMP_BINDING. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B8DN21-1 [UniParc]FASTAAdd to Basket

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    MTYTTKFTAK DYKEFCATFR IDAPDTFNFA FDVLDPIAAA DPGRLCIAHV    50
    DDAGVRRDYT FAWMAEASAK LANALRLRGI RKGDRVMLVL YRRIEFWVSM 100
    LALHRLGAVA IPAPAQLTPK DIVFRVERAK TRCVIVDHSI TERVEAARPD 150
    CPGLAVCVQV GGDALPRGWV DYDTIFTPAE ARFPRPESPL EFAGGEDPLL 200
    IFFSSGTTGM PKMVEHVHTY PLGHLLTGMY WHDLVPGDLH LTLADTGWGK 250
    AVWGKFYGQW MAGASVFVYD FRGKFEPAAL LDVLAAHAVT TFCAPPTVYR 300
    FLVRQDLSAY DLSKLRHCTT AGELLNDSVF HDWKAATGLE IHEGYGQTET 350
    TLQIATLPCM TPKAGSIGRP MPGWDVVLQD AAGNICPPGE EGEICVRVAE 400
    GLPVGLFRGY LEEPEKTASV MFGGYYHTGD KAWMDEDGYY WFLGRVDDLI 450
    KSSGYRIGPF EVESALVAHP AVVEAAVTGV PDPLRGQAVK ATVVLAAGYT 500
    ASDALTKELQ DHVKKVTAPY KYPRIIDYVA ELPKTISGKI KRAEIRERDQ 550
    QASGPGA 557
    Length:557
    Mass (Da):61,243
    Last modified:March 3, 2009 - v1
    Checksum:i86C1F1A33039193F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001197 Genomic DNA. Translation: ACL06965.1.
    RefSeqiYP_002434433.1. NC_011769.1.

    Genome annotation databases

    EnsemblBacteriaiACL06965; ACL06965; DvMF_0003.
    GeneIDi7171870.
    KEGGidvm:DvMF_0003.
    PATRICi21769871. VBIDesVul86729_0004.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001197 Genomic DNA. Translation: ACL06965.1 .
    RefSeqi YP_002434433.1. NC_011769.1.

    3D structure databases

    ProteinModelPortali B8DN21.
    ModBasei Search...

    Protein-protein interaction databases

    STRINGi 883.DvMF_0003.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACL06965 ; ACL06965 ; DvMF_0003 .
    GeneIDi 7171870.
    KEGGi dvm:DvMF_0003.
    PATRICi 21769871. VBIDesVul86729_0004.

    Phylogenomic databases

    eggNOGi COG0365.
    HOGENOMi HOG000229982.
    KOi K01895.
    OMAi GEICVRV.
    OrthoDBi EOG60GRR8.

    Enzyme and pathway databases

    BioCyci DVUL883:GCJ5-3-MONOMER.

    Family and domain databases

    InterProi IPR025110. AMP-bd_C.
    IPR020845. AMP-binding_CS.
    IPR000873. AMP-dep_Synth/Lig.
    [Graphical view ]
    Pfami PF00501. AMP-binding. 1 hit.
    PF13193. AMP-binding_C. 1 hit.
    [Graphical view ]
    PROSITEi PS00455. AMP_BINDING. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Desulfovibrio vulgaris str. 'Miyazaki F'."
      Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Hazen T.C., Richardson P.
      Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Miyazaki F / DSM 19637.

    Entry informationi

    Entry nameiB8DN21_DESVM
    AccessioniPrimary (citable) accession number: B8DN21
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 3, 2009
    Last sequence update: March 3, 2009
    Last modified: May 14, 2014
    This is version 28 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    External Data

    Dasty 3

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