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Protein

Glycogen synthase

Gene

glgA

Organism
Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathwayi: glycogen biosynthesis

This protein is involved in the pathway glycogen biosynthesis, which is part of Glycan biosynthesis.UniRule annotation
View all proteins of this organism that are known to be involved in the pathway glycogen biosynthesis and in Glycan biosynthesis.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei17ADP-glucoseUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthaseUniRule annotation (EC:2.4.1.21UniRule annotation)
Alternative name(s):
Starch [bacterial glycogen] synthaseUniRule annotation
Gene namesi
Name:glgAUniRule annotation
Ordered Locus Names:DvMF_0841
OrganismiDesulfovibrio vulgaris (strain Miyazaki F / DSM 19637)
Taxonomic identifieri883 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfovibrionaceaeDesulfovibrio
Proteomesi
  • UP000001361 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10001260641 – 488Glycogen synthaseAdd BLAST488

Interactioni

Protein-protein interaction databases

STRINGi883.DvMF_0841.

Structurei

3D structure databases

ProteinModelPortaliB8DL94.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CXW. Bacteria.
COG0297. LUCA.
HOGENOMiHOG000294941.
KOiK00703.
OMAiGFRETEA.
OrthoDBiPOG091H08HW.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth. 1 hit.
InterProiIPR001296. Glyco_trans_1.
IPR011835. GS/SS.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

B8DL94-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRREVVFVTS EMYPFSKSGG LGDVLGAQPL ALHRMGVPTS VITPFYGRLR
60 70 80 90 100
TADYGIHLTV SDCHVGYPWD PITCDIYEAD YHGMKVYFVH RGEYFDRRYY
110 120 130 140 150
YNDHKGDYFD NCERFIFFCR AAMALLRRLG TPPAVLHAND WQSGLVPAYL
160 170 180 190 200
HFWRQTDPFW ADTRSVMTIH NLAFQGRFAS RLFTGCGLPP QAWTMSGVEF
210 220 230 240 250
WGDFNLLKAG IAYADMVTTV SPSYAREILG PAYGCGLEGI LQVRQHALHG
260 270 280 290 300
ILNGADYGIW NPAQDKFLPC RYGPDDPQGF AGKQRCKAAL LDELGLAPEL
310 320 330 340 350
AHRPVLGFIG RLRGQKGIDL LLDIVPRLME RNVGVIILGE GNLAHEARAL
360 370 380 390 400
DLMETYRGRL CAIVGYTEDL AHRIQAGSDI FLMPSRYEPC GLTQMYALRY
410 420 430 440 450
GTPPVATAVG GLRDTIVPWP SPEATGFTFG RSDPQLFLEA ILDAVHYWEH
460 470 480
DTEGWRAMMT RAMHQDFSWE RAGRSYLNLY RQLGFDFS
Length:488
Mass (Da):55,100
Last modified:March 3, 2009 - v1
Checksum:iB333FEDEA852F783
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001197 Genomic DNA. Translation: ACL07797.1.
RefSeqiWP_012611989.1. NC_011769.1.

Genome annotation databases

EnsemblBacteriaiACL07797; ACL07797; DvMF_0841.
KEGGidvm:DvMF_0841.
PATRICi21771671. VBIDesVul86729_0884.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001197 Genomic DNA. Translation: ACL07797.1.
RefSeqiWP_012611989.1. NC_011769.1.

3D structure databases

ProteinModelPortaliB8DL94.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi883.DvMF_0841.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACL07797; ACL07797; DvMF_0841.
KEGGidvm:DvMF_0841.
PATRICi21771671. VBIDesVul86729_0884.

Phylogenomic databases

eggNOGiENOG4105CXW. Bacteria.
COG0297. LUCA.
HOGENOMiHOG000294941.
KOiK00703.
OMAiGFRETEA.
OrthoDBiPOG091H08HW.

Enzyme and pathway databases

UniPathwayiUPA00164.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth. 1 hit.
InterProiIPR001296. Glyco_trans_1.
IPR011835. GS/SS.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiGLGA_DESVM
AccessioniPrimary (citable) accession number: B8DL94
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: March 3, 2009
Last modified: November 2, 2016
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.