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B8DL94 (GLGA_DESVM) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:DvMF_0841
OrganismDesulfovibrio vulgaris (strain Miyazaki F / DSM 19637) [Complete proteome] [HAMAP]
Taxonomic identifier883 [NCBI]
Taxonomic lineageBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfovibrionaceaeDesulfovibrio

Protein attributes

Sequence length488 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 488488Glycogen synthase HAMAP-Rule MF_00484
PRO_1000126064

Sites

Binding site171ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
B8DL94 [UniParc].

Last modified March 3, 2009. Version 1.
Checksum: B333FEDEA852F783

FASTA48855,100
        10         20         30         40         50         60 
MRREVVFVTS EMYPFSKSGG LGDVLGAQPL ALHRMGVPTS VITPFYGRLR TADYGIHLTV 

        70         80         90        100        110        120 
SDCHVGYPWD PITCDIYEAD YHGMKVYFVH RGEYFDRRYY YNDHKGDYFD NCERFIFFCR 

       130        140        150        160        170        180 
AAMALLRRLG TPPAVLHAND WQSGLVPAYL HFWRQTDPFW ADTRSVMTIH NLAFQGRFAS 

       190        200        210        220        230        240 
RLFTGCGLPP QAWTMSGVEF WGDFNLLKAG IAYADMVTTV SPSYAREILG PAYGCGLEGI 

       250        260        270        280        290        300 
LQVRQHALHG ILNGADYGIW NPAQDKFLPC RYGPDDPQGF AGKQRCKAAL LDELGLAPEL 

       310        320        330        340        350        360 
AHRPVLGFIG RLRGQKGIDL LLDIVPRLME RNVGVIILGE GNLAHEARAL DLMETYRGRL 

       370        380        390        400        410        420 
CAIVGYTEDL AHRIQAGSDI FLMPSRYEPC GLTQMYALRY GTPPVATAVG GLRDTIVPWP 

       430        440        450        460        470        480 
SPEATGFTFG RSDPQLFLEA ILDAVHYWEH DTEGWRAMMT RAMHQDFSWE RAGRSYLNLY 


RQLGFDFS 

« Hide

References

[1]"Complete sequence of Desulfovibrio vulgaris str. 'Miyazaki F'."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Hazen T.C., Richardson P.
Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Miyazaki F / DSM 19637.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001197 Genomic DNA. Translation: ACL07797.1.
RefSeqYP_002435265.1. NC_011769.1.

3D structure databases

ProteinModelPortalB8DL94.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING883.DvMF_0841.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACL07797; ACL07797; DvMF_0841.
GeneID7172730.
KEGGdvm:DvMF_0841.
PATRIC21771671. VBIDesVul86729_0884.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294941.
KOK00703.
OMAVHCNDWQ.
OrthoDBEOG6JTC6Z.
ProtClustDBCLSK705662.

Enzyme and pathway databases

BioCycDVUL883:GCJ5-864-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_DESVM
AccessionPrimary (citable) accession number: B8DL94
Entry history
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: March 3, 2009
Last modified: February 19, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways