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B8DGZ4 (B8DGZ4_LISMH) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:LMHCC_0425
OrganismListeria monocytogenes serotype 4a (strain HCC23) [Complete proteome] [HAMAP] EMBL ACK38782.1
Taxonomic identifier552536 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacillalesListeriaceaeListeria

Protein attributes

Sequence length751 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functioncarbohydrate binding

Inferred from electronic annotation. Source: InterPro

catalytic activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B8DGZ4 [UniParc].

Last modified March 3, 2009. Version 1.
Checksum: 414B7665A3FD6B6F

FASTA75186,558
        10         20         30         40         50         60 
MAQKQLFEIE PWTLRTTKLD KENKRLQESL TSLGNGYMGM RGNFEEGYSG DGHIGTYYAG 

        70         80         90        100        110        120 
VWFPDKTRVG WWKNGYPDYF GKVINGLNFI GIEVRLDGEK LDLFVDEVSD FELVLDMEKG 

       130        140        150        160        170        180 
VLKRQFTVVK NNKTFRISAE RFLSVATKEL AVIHYQVEAL SPAKVELTSF LDGNVQNEDA 

       190        200        210        220        230        240 
NYEEMFWQEV EKASSASRGS LVTKTIPNNF GTPRFTVSAV MENKTNAANE TNQTKALYAE 

       250        260        270        280        290        300 
NYFQFDLQEK EVAQIEKRVV ITTSRDYVEG EILPAGEKIL KSLEAKTYDE LLAAHVSGWR 

       310        320        330        340        350        360 
ERWDKADVEI AGDDSAQQGI RFNIFQLFAT YYGEDARLNI GPKGFTGEKY GGATYWDTEA 

       370        380        390        400        410        420 
FALPMYLSLT DKSVSHNLLK YRHDQLDGAK INAQKIGLAG ALYPMVTFTG VECHNEWEIT 

       430        440        450        460        470        480 
FEEIHRNGAI AYAIYNYTNY TGDDSYLKTD GIEVLTEITR FWADRVHLSD RLDKYMIHGV 

       490        500        510        520        530        540 
TGPNEYDNNV SNNWYTNYIA AWTIRYTLEN LDAEAKKRLD VTEYEIAKWE DIEHRMYYPF 

       550        560        570        580        590        600 
DEKWQIFVQH DTFLDKELRS TDTLKPEDMP INQNWSWDKI LRSCFIKQAD VLQGLYLFYD 

       610        620        630        640        650        660 
DFDTKQRNFE FYEPLTVHES SLSPAVHAVL ASELGKYDKA VELYKRTARL DLDNINNDTE 

       670        680        690        700        710        720 
DGLHITSMAG SWLSIVQGFA GMRVTAGELS FAPFLPDGWE NYRFKINFRN RLLEVKVEVG 

       730        740        750 
KVTVKLCHGE PIHLEMYKKE YLLETAITVE F 

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References

[1]"Genome sequence of lineage III Listeria monocytogenes strain HCC23."
Steele C.L., Donaldson J.R., Paul D., Banes M.M., Arick T., Bridges S.M., Lawrence M.L.
J. Bacteriol. 193:3679-3680(2011) [PubMed: 21602330] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: HCC23.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001175 Genomic DNA. Translation: ACK38782.1.
RefSeqYP_002349396.1. NC_011660.1.

3D structure databases

ProteinModelPortalB8DGZ4.
ModBaseSearch...

Protein-protein interaction databases

STRINGB8DGZ4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7079779.
GenomeReviewsGene locus LMHCC_0425 in contig CP001175_GR.
KEGGlmh:LMHCC_0425.
PATRIC20315915. VBILisMon86872_0418.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG727686.
OMAQAQHNAR.
ProtClustDBPRK13807.

Family and domain databases

InterProIPR008928. 6-hairpin_glycosidase-like.
IPR012341. 6hp_glycosidase.
IPR011013. Glyco_hydro-type_carb-bd.
IPR005194. Glyco_hydro_65_C.
IPR005195. Glyco_hydro_65_M.
IPR005196. Glyco_hydro_65_N.
IPR017045. Malt_Pase/Glycosyl_Hdrlase.
[Graphical view]
Gene3DG3DSA:1.50.10.10. CelA/Cel48F_cat. 1 hit.
G3DSA:2.70.98.40. Glyco_hydro_65_N. 1 hit.
KOK00691.
PfamPF03633. Glyco_hydro_65C. 1 hit.
PF03632. Glyco_hydro_65m. 1 hit.
PF03636. Glyco_hydro_65N. 1 hit.
[Graphical view]
PIRSFPIRSF036289. Glycosyl_hydrolase_malt_phosph. 1 hit.
SUPFAMSSF74650. Gal_mut_like. 1 hit.
SSF48208. Glyco_trans_6hp. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB8DGZ4_LISMH
AccessionPrimary (citable) accession number: B8DGZ4
Entry history
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: December 14, 2011
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)