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B8DGV4 (B8DGV4_LISMH) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Chitinase B EMBL ACK40857.1
Gene names
Ordered Locus Names:LMHCC_2522
OrganismListeria monocytogenes serotype 4a (strain HCC23) [Complete proteome] [HAMAP] EMBL ACK40857.1
Taxonomic identifier552536 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacillales › Listeriaceae › Listeria

Protein attributes

Sequence length760 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processchitin catabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular componentextracellular region

Inferred from electronic annotation. Source: InterPro

   Molecular functioncarbohydrate binding

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

chitinase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B8DGV4 [UniParc].

Last modified March 3, 2009. Version 1.
Checksum: 6E71499C5CF29930

FASTA76082,073
        10         20         30         40         50         60 
MNKKMKKLFS ITSVVLLVLS LVVVSIGAQP KRAKAAENVP QYRNVMYYGD WSIWGGEGNF 

        70         80         90        100        110        120 
YPKDIPADQL THLNFAFLDF NSNGDLVFTD KDAAVGAPVG QEGVQWGGAN AGVLNAIQDL 

       130        140        150        160        170        180 
RAQNPNLKIG VSVGGWSKSG DFSTVAADPT KRANFVKNVM KFVKYTNMDF VDLDWEYPAS 

       190        200        210        220        230        240 
VRDADLVDNK NDEGTPNAKP ADKQNFITLL QDLRTALDKQ GVDINKKYEL SVALPAAKST 

       250        260        270        280        290        300 
LENGIDVANL FKVVDFANVM TYDLNGAWTP NSAHHTALYG NPKDPNYDSG FSVDQTVKYL 

       310        320        330        340        350        360 
KEKGAVSNKI VVGAAFYTRG WNKVAAGTDT ALPGLFQAAE KTNKDADGSL TYGANNENPI 

       370        380        390        400        410        420 
KTGDGGRAGG VWAYRSIDAL KAKTPTLKEY WDDTAKAPYL YSKETGEFYT YDNTRSIGYK 

       430        440        450        460        470        480 
AQYVKDNNLG GMISWMQSQD KTTTSTKRDE LTKAIKTGLF GTSAIPQNAI TYANLNVVAT 

       490        500        510        520        530        540 
VKPYSENGVG YEITITNNEK ADETNEVLKS TELSFETVKL PKFYIPVKAG ETLTAGDYKA 

       550        560        570        580        590        600 
GTVTTSGGNT VVDLASVYDA QQIPQGASYT FRLKSSASSV DVANISKIDL TQRMVKSSVE 

       610        620        630        640        650        660 
FGKQTIFGGG TVVPDPSDTE APTVPKALTS SNVTDKSATL SWTASTDNKA VAGYKVYRNG 

       670        680        690        700        710        720 
TEVGSVSGTT FTDSGLTAKT AYTYTVKAYD AAGNFSAASS TLTVTTLDAA TPPATPAWDA 

       730        740        750        760 
AKTYNKGDRV SYKGKTYEAQ WWTQGNEPGA EQWGPWLLIN

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References

[1]"Genome sequence of lineage III Listeria monocytogenes strain HCC23."
Steele C.L., Donaldson J.R., Paul D., Banes M.M., Arick T., Bridges S.M., Lawrence M.L.
J. Bacteriol. 193:3679-3680(2011) [PubMed: 21602330] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: HCC23.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001175 Genomic DNA. Translation: ACK40857.1.
RefSeqYP_002351471.1. NC_011660.1.

3D structure databases

ProteinModelPortalB8DGV4.
ModBaseSearch...

Protein-protein interaction databases

STRINGB8DGV4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7079288.
GenomeReviewsGene locus LMHCC_2522 in contig CP001175_GR.
KEGGlmh:LMHCC_2522.
PATRIC20320189. VBILisMon86872_2504.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG422984.
OMAYGANNEN.
ProtClustDBCLSK563779.

Family and domain databases

InterProIPR003610. CBM_fam5/12.
IPR011583. Chitinase_II.
IPR003961. Fibronectin_type3.
IPR001223. Glyco_hydro18cat.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view]
Gene3DG3DSA:2.10.10.20. G3DSA:2.10.10.20. 1 hit.
G3DSA:3.20.20.80. Glyco_hydro_cat. 2 hits.
G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
KOK01183.
PfamPF02839. CBM_5_12. 1 hit.
PF00041. fn3. 1 hit.
PF00704. Glyco_hydro_18. 1 hit.
[Graphical view]
SMARTSM00495. ChtBD3. 1 hit.
SM00060. FN3. 1 hit.
SM00636. Glyco_18. 1 hit.
[Graphical view]
SUPFAMSSF51055. CBM_5_12. 1 hit.
SSF49265. FN_III-like. 1 hit.
SSF51445. Glyco_hydro_cat. 1 hit.
PROSITEPS50853. FN3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB8DGV4_LISMH
AccessionPrimary (citable) accession number: B8DGV4
Entry history
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: January 25, 2012
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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